JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C1orf198_chr1_230832119_230873521	0/0	g0257	1	0	0	1	0	0	C1orf198	chr1	230832119	230873521
C1orf198_chr1_230832119_230873521	0/0	g0258	1	0	0	1	0	0	C1orf198	chr1	230832119	230873521
C1orf198_chr1_230832119_230873521	0/0	g0259	1	0	1	0	0	0	C1orf198	chr1	230832119	230873521
C1orf198_chr1_230832119_230873521	0/0	g0260	1	0	0	1	0	0	C1orf198	chr1	230832119	230873521
C1orf198_chr1_230832119_230873521	0/0	g0261	1	0	0	1	0	0	C1orf198	chr1	230832119	230873521
C1orf198_chr1_230832119_230873521	0/0	g0262	1	0	0	1	0	0	C1orf198	chr1	230832119	230873521
C1orf198_chr1_230832119_230873521	0/0	g0263	1	1	0	0	0	0	C1orf198	chr1	230832119	230873521
C1orf198_chr1_230832119_230873521	0/0	g0264	1	0	0	0	1	0	C1orf198	chr1	230832119	230873521
C1orf198_chr1_230832119_230873521	0/0	g0265	1	0	0	0	0	1	C1orf198	chr1	230832119	230873521
C1orf198_chr1_230832119_230873521	0/0	g0266	1	0	1	0	0	0	C1orf198	chr1	230832119	230873521
C1orf198_chr1_230832119_230873521	0/0	g0267	1	0	1	0	0	0	C1orf198	chr1	230832119	230873521
C1orf198_chr1_230832119_230873521	0/0	g0268	1	0	0	1	0	0	C1orf198	chr1	230832119	230873521
C1orf198_chr1_230832119_230873521	0/0	g0269	1	0	0	0	0	1	C1orf198	chr1	230832119	230873521
C1orf198_chr1_230832119_230873521	0/0	g0270	1	0	0	1	0	0	C1orf198	chr1	230832119	230873521
C1orf198_chr1_230832119_230873521	0/0	g0271	1	0	0	1	0	0	C1orf198	chr1	230832119	230873521
C1orf198_chr1_230832119_230873521	0/0	g0272	1	1	0	0	0	0	C1orf198	chr1	230832119	230873521
C1orf198_chr1_230832119_230873521	0/0	g0273	1	1	0	0	0	0	C1orf198	chr1	230832119	230873521
C1orf198_chr1_230832119_230873521	0/0	g0274	1	0	0	1	0	0	C1orf198	chr1	230832119	230873521
C1orf198_chr1_230832119_230873521	0/0	g0275	1	0	0	1	0	0	C1orf198	chr1	230832119	230873521
C1orf202_chr1_244724701_244736015	1/1	g0000	418	96	72	190	16	42	C1orf202	chr1	244724701	244736015
C1orf210_chr1_43276877_43290581	0/0	g0001	122	7	23	68	8	16	C1orf210	chr1	43276877	43290581
C1orf210_chr1_43276877_43290581	0/0	g0002	77	1	21	41	6	8	C1orf210	chr1	43276877	43290581
C1orf210_chr1_43276877_43290581	0/0	g0003	68	19	1	42	0	6	C1orf210	chr1	43276877	43290581
C1orf210_chr1_43276877_43290581	0/0	g0004	30	3	4	17	1	5	C1orf210	chr1	43276877	43290581
C1orf210_chr1_43276877_43290581	0/1	g0005	29	8	6	10	0	4	C1orf210	chr1	43276877	43290581
C1orf210_chr1_43276877_43290581	0/0	g0006	16	4	11	1	0	0	C1orf210	chr1	43276877	43290581
C1orf210_chr1_43276877_43290581	0/0	g0007	16	2	1	12	0	1	C1orf210	chr1	43276877	43290581
C1orf210_chr1_43276877_43290581	0/0	g0008	14	12	2	0	0	0	C1orf210	chr1	43276877	43290581
C1orf210_chr1_43276877_43290581	0/0	g0009	8	6	2	0	0	0	C1orf210	chr1	43276877	43290581
C1orf210_chr1_43276877_43290581	0/0	g0010	6	4	0	2	0	0	C1orf210	chr1	43276877	43290581
C1orf210_chr1_43276877_43290581	0/0	g0011	6	0	6	0	0	0	C1orf210	chr1	43276877	43290581
C1orf210_chr1_43276877_43290581	0/0	g0012	5	5	0	0	0	0	C1orf210	chr1	43276877	43290581
C1orf210_chr1_43276877_43290581	0/0	g0013	3	3	0	0	0	0	C1orf210	chr1	43276877	43290581
C1orf210_chr1_43276877_43290581	0/0	g0014	3	2	1	0	0	0	C1orf210	chr1	43276877	43290581
C1orf210_chr1_43276877_43290581	0/0	g0015	3	0	2	1	0	0	C1orf210	chr1	43276877	43290581
C1orf210_chr1_43276877_43290581	0/0	g0016	3	3	0	0	0	0	C1orf210	chr1	43276877	43290581
C1orf210_chr1_43276877_43290581	0/0	g0017	2	0	0	0	1	1	C1orf210	chr1	43276877	43290581
C1orf210_chr1_43276877_43290581	0/0	g0018	2	2	0	0	0	0	C1orf210	chr1	43276877	43290581
C1orf210_chr1_43276877_43290581	0/0	g0019	2	2	0	0	0	0	C1orf210	chr1	43276877	43290581
C1orf210_chr1_43276877_43290581	0/0	g0020	2	1	1	0	0	0	C1orf210	chr1	43276877	43290581
C1orf210_chr1_43276877_43290581	0/0	g0021	2	0	0	2	0	0	C1orf210	chr1	43276877	43290581
C1orf210_chr1_43276877_43290581	1/0	g0022	2	1	0	0	0	0	C1orf210	chr1	43276877	43290581
C1orf210_chr1_43276877_43290581	0/0	g0023	2	0	0	2	0	0	C1orf210	chr1	43276877	43290581
C1orf210_chr1_43276877_43290581	0/0	g0024	1	1	0	0	0	0	C1orf210	chr1	43276877	43290581
C1orf210_chr1_43276877_43290581	0/0	g0025	1	1	0	0	0	0	C1orf210	chr1	43276877	43290581
C1orf210_chr1_43276877_43290581	0/0	g0026	1	0	0	1	0	0	C1orf210	chr1	43276877	43290581
C1orf210_chr1_43276877_43290581	0/0	g0027	1	0	0	1	0	0	C1orf210	chr1	43276877	43290581
C1orf210_chr1_43276877_43290581	0/0	g0028	1	1	0	0	0	0	C1orf210	chr1	43276877	43290581
C1orf210_chr1_43276877_43290581	0/0	g0029	1	1	0	0	0	0	C1orf210	chr1	43276877	43290581
C1orf210_chr1_43276877_43290581	0/0	g0030	1	0	0	0	0	1	C1orf210	chr1	43276877	43290581