JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C1orf210_chr1_43276877_43290581	0/0	g0031	1	0	0	1	0	0	C1orf210	chr1	43276877	43290581
C1orf210_chr1_43276877_43290581	0/0	g0032	1	0	0	1	0	0	C1orf210	chr1	43276877	43290581
C1orf210_chr1_43276877_43290581	0/0	g0033	1	1	0	0	0	0	C1orf210	chr1	43276877	43290581
C1orf210_chr1_43276877_43290581	0/0	g0034	1	0	0	1	0	0	C1orf210	chr1	43276877	43290581
C1orf210_chr1_43276877_43290581	0/0	g0035	1	1	0	0	0	0	C1orf210	chr1	43276877	43290581
C1orf210_chr1_43276877_43290581	0/0	g0036	1	1	0	0	0	0	C1orf210	chr1	43276877	43290581
C1orf210_chr1_43276877_43290581	0/0	g0037	1	1	0	0	0	0	C1orf210	chr1	43276877	43290581
C1orf210_chr1_43276877_43290581	0/0	g0038	1	0	0	0	0	1	C1orf210	chr1	43276877	43290581
C1orf210_chr1_43276877_43290581	0/0	g0039	1	0	1	0	0	0	C1orf210	chr1	43276877	43290581
C1orf210_chr1_43276877_43290581	0/0	g0040	1	0	0	1	0	0	C1orf210	chr1	43276877	43290581
C1orf210_chr1_43276877_43290581	0/0	g0041	1	0	0	0	0	1	C1orf210	chr1	43276877	43290581
C1orf210_chr1_43276877_43290581	0/0	g0042	1	1	0	0	0	0	C1orf210	chr1	43276877	43290581
C1orf216_chr1_35708877_35723884	0/0	g0001	136	12	32	46	13	33	C1orf216	chr1	35708877	35723884
C1orf216_chr1_35708877_35723884	0/0	g0002	100	6	20	71	1	2	C1orf216	chr1	35708877	35723884
C1orf216_chr1_35708877_35723884	1/0	g0003	53	37	9	0	2	4	C1orf216	chr1	35708877	35723884
C1orf216_chr1_35708877_35723884	0/1	g0004	29	16	2	8	0	2	C1orf216	chr1	35708877	35723884
C1orf216_chr1_35708877_35723884	0/0	g0005	13	13	0	0	0	0	C1orf216	chr1	35708877	35723884
C1orf216_chr1_35708877_35723884	0/0	g0006	6	0	0	6	0	0	C1orf216	chr1	35708877	35723884
C1orf216_chr1_35708877_35723884	0/0	g0007	4	2	2	0	0	0	C1orf216	chr1	35708877	35723884
C1orf216_chr1_35708877_35723884	0/0	g0008	3	0	1	0	0	2	C1orf216	chr1	35708877	35723884
C1orf216_chr1_35708877_35723884	0/0	g0009	3	0	0	0	0	3	C1orf216	chr1	35708877	35723884
C1orf216_chr1_35708877_35723884	0/0	g0010	2	2	0	0	0	0	C1orf216	chr1	35708877	35723884
C1orf216_chr1_35708877_35723884	0/0	g0011	2	0	0	2	0	0	C1orf216	chr1	35708877	35723884
C1orf216_chr1_35708877_35723884	0/0	g0012	2	0	0	2	0	0	C1orf216	chr1	35708877	35723884
C1orf216_chr1_35708877_35723884	0/0	g0013	2	2	0	0	0	0	C1orf216	chr1	35708877	35723884
C1orf216_chr1_35708877_35723884	0/0	g0014	2	0	0	2	0	0	C1orf216	chr1	35708877	35723884
C1orf216_chr1_35708877_35723884	0/0	g0015	2	0	2	0	0	0	C1orf216	chr1	35708877	35723884
C1orf216_chr1_35708877_35723884	0/0	g0016	1	0	0	1	0	0	C1orf216	chr1	35708877	35723884
C1orf216_chr1_35708877_35723884	0/0	g0017	1	1	0	0	0	0	C1orf216	chr1	35708877	35723884
C1orf216_chr1_35708877_35723884	0/0	g0018	1	0	1	0	0	0	C1orf216	chr1	35708877	35723884
C1orf216_chr1_35708877_35723884	0/0	g0019	1	0	1	0	0	0	C1orf216	chr1	35708877	35723884
C1orf216_chr1_35708877_35723884	0/0	g0020	1	0	1	0	0	0	C1orf216	chr1	35708877	35723884
C1orf216_chr1_35708877_35723884	0/0	g0021	1	0	0	1	0	0	C1orf216	chr1	35708877	35723884
C1orf216_chr1_35708877_35723884	0/0	g0022	1	1	0	0	0	0	C1orf216	chr1	35708877	35723884
C1orf216_chr1_35708877_35723884	0/0	g0023	1	1	0	0	0	0	C1orf216	chr1	35708877	35723884
C1orf216_chr1_35708877_35723884	0/0	g0024	1	1	0	0	0	0	C1orf216	chr1	35708877	35723884
C1orf216_chr1_35708877_35723884	0/0	g0025	1	1	0	0	0	0	C1orf216	chr1	35708877	35723884
C1orf216_chr1_35708877_35723884	0/0	g0026	1	0	0	1	0	0	C1orf216	chr1	35708877	35723884
C1orf216_chr1_35708877_35723884	0/0	g0027	1	1	0	0	0	0	C1orf216	chr1	35708877	35723884
C1orf216_chr1_35708877_35723884	0/0	g0028	1	0	0	1	0	0	C1orf216	chr1	35708877	35723884
C1orf216_chr1_35708877_35723884	0/0	g0029	1	0	0	0	0	1	C1orf216	chr1	35708877	35723884
C1orf216_chr1_35708877_35723884	0/0	g0030	1	0	0	1	0	0	C1orf216	chr1	35708877	35723884
C1orf216_chr1_35708877_35723884	0/0	g0031	1	0	1	0	0	0	C1orf216	chr1	35708877	35723884
C1orf216_chr1_35708877_35723884	0/0	g0032	1	0	0	0	0	1	C1orf216	chr1	35708877	35723884
C1orf21_chr1_184382029_184634019	0/0	g0001	2	0	2	0	0	0	C1orf21	chr1	184382029	184634019
C1orf21_chr1_184382029_184634019	0/0	g0002	1	1	0	0	0	0	C1orf21	chr1	184382029	184634019
C1orf21_chr1_184382029_184634019	0/0	g0003	1	1	0	0	0	0	C1orf21	chr1	184382029	184634019
C1orf21_chr1_184382029_184634019	0/0	g0004	1	0	0	0	1	0	C1orf21	chr1	184382029	184634019
C1orf21_chr1_184382029_184634019	0/0	g0005	1	0	1	0	0	0	C1orf21	chr1	184382029	184634019
C1orf21_chr1_184382029_184634019	0/0	g0006	1	1	0	0	0	0	C1orf21	chr1	184382029	184634019