JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C1orf232_chr1_26159101_26173963	0/0	g0050	1	0	1	0	0	0	C1orf232	chr1	26159101	26173963
C1orf232_chr1_26159101_26173963	0/0	g0051	1	1	0	0	0	0	C1orf232	chr1	26159101	26173963
C1orf232_chr1_26159101_26173963	0/0	g0052	1	1	0	0	0	0	C1orf232	chr1	26159101	26173963
C1orf232_chr1_26159101_26173963	0/0	g0053	1	1	0	0	0	0	C1orf232	chr1	26159101	26173963
C1orf232_chr1_26159101_26173963	0/0	g0054	1	1	0	0	0	0	C1orf232	chr1	26159101	26173963
C1orf232_chr1_26159101_26173963	0/0	g0055	1	0	0	1	0	0	C1orf232	chr1	26159101	26173963
C1orf35_chr1_228095731_228108325	1/1	g0001	286	62	45	136	9	32	C1orf35	chr1	228095731	228108325
C1orf35_chr1_228095731_228108325	0/0	g0002	61	20	11	25	0	5	C1orf35	chr1	228095731	228108325
C1orf35_chr1_228095731_228108325	0/0	g0003	13	0	0	13	0	0	C1orf35	chr1	228095731	228108325
C1orf35_chr1_228095731_228108325	0/0	g0004	11	0	6	0	1	4	C1orf35	chr1	228095731	228108325
C1orf35_chr1_228095731_228108325	0/0	g0005	7	0	0	7	0	0	C1orf35	chr1	228095731	228108325
C1orf35_chr1_228095731_228108325	0/0	g0006	6	0	0	6	0	0	C1orf35	chr1	228095731	228108325
C1orf35_chr1_228095731_228108325	0/0	g0007	4	4	0	0	0	0	C1orf35	chr1	228095731	228108325
C1orf35_chr1_228095731_228108325	0/0	g0008	3	0	0	3	0	0	C1orf35	chr1	228095731	228108325
C1orf35_chr1_228095731_228108325	0/0	g0009	3	0	1	0	2	0	C1orf35	chr1	228095731	228108325
C1orf35_chr1_228095731_228108325	0/0	g0010	3	0	3	0	0	0	C1orf35	chr1	228095731	228108325
C1orf35_chr1_228095731_228108325	0/0	g0011	3	3	0	0	0	0	C1orf35	chr1	228095731	228108325
C1orf35_chr1_228095731_228108325	0/0	g0012	3	0	0	3	0	0	C1orf35	chr1	228095731	228108325
C1orf35_chr1_228095731_228108325	0/0	g0013	2	0	2	0	0	0	C1orf35	chr1	228095731	228108325
C1orf35_chr1_228095731_228108325	0/0	g0014	2	0	0	0	1	1	C1orf35	chr1	228095731	228108325
C1orf35_chr1_228095731_228108325	0/0	g0015	1	0	0	1	0	0	C1orf35	chr1	228095731	228108325
C1orf35_chr1_228095731_228108325	0/0	g0016	1	1	0	0	0	0	C1orf35	chr1	228095731	228108325
C1orf35_chr1_228095731_228108325	0/0	g0017	1	1	0	0	0	0	C1orf35	chr1	228095731	228108325
C1orf35_chr1_228095731_228108325	0/0	g0018	1	1	0	0	0	0	C1orf35	chr1	228095731	228108325
C1orf35_chr1_228095731_228108325	0/0	g0019	1	1	0	0	0	0	C1orf35	chr1	228095731	228108325
C1orf35_chr1_228095731_228108325	0/0	g0020	1	1	0	0	0	0	C1orf35	chr1	228095731	228108325
C1orf35_chr1_228095731_228108325	0/0	g0021	1	0	0	1	0	0	C1orf35	chr1	228095731	228108325
C1orf35_chr1_228095731_228108325	0/0	g0022	1	0	0	0	1	0	C1orf35	chr1	228095731	228108325
C1orf35_chr1_228095731_228108325	0/0	g0023	1	0	0	1	0	0	C1orf35	chr1	228095731	228108325
C1orf35_chr1_228095731_228108325	0/0	g0024	1	0	0	1	0	0	C1orf35	chr1	228095731	228108325
C1orf35_chr1_228095731_228108325	0/0	g0025	1	0	1	0	0	0	C1orf35	chr1	228095731	228108325
C1orf35_chr1_228095731_228108325	0/0	g0026	1	0	0	1	0	0	C1orf35	chr1	228095731	228108325
C1orf35_chr1_228095731_228108325	0/0	g0027	1	0	1	0	0	0	C1orf35	chr1	228095731	228108325
C1orf43_chr1_154201720_154225590	0/0	g0001	35	2	5	27	0	1	C1orf43	chr1	154201720	154225590
C1orf43_chr1_154201720_154225590	0/0	g0002	26	1	7	11	2	5	C1orf43	chr1	154201720	154225590
C1orf43_chr1_154201720_154225590	0/0	g0003	25	0	4	19	0	2	C1orf43	chr1	154201720	154225590
C1orf43_chr1_154201720_154225590	0/0	g0004	18	0	2	15	0	1	C1orf43	chr1	154201720	154225590
C1orf43_chr1_154201720_154225590	0/0	g0005	15	2	6	2	1	4	C1orf43	chr1	154201720	154225590
C1orf43_chr1_154201720_154225590	0/0	g0006	14	1	5	7	0	1	C1orf43	chr1	154201720	154225590
C1orf43_chr1_154201720_154225590	0/0	g0007	12	12	0	0	0	0	C1orf43	chr1	154201720	154225590
C1orf43_chr1_154201720_154225590	0/0	g0008	12	1	6	1	0	4	C1orf43	chr1	154201720	154225590
C1orf43_chr1_154201720_154225590	0/0	g0009	6	0	1	3	0	2	C1orf43	chr1	154201720	154225590
C1orf43_chr1_154201720_154225590	0/0	g0010	6	2	0	2	0	2	C1orf43	chr1	154201720	154225590
C1orf43_chr1_154201720_154225590	0/0	g0011	5	0	2	3	0	0	C1orf43	chr1	154201720	154225590
C1orf43_chr1_154201720_154225590	0/0	g0012	4	4	0	0	0	0	C1orf43	chr1	154201720	154225590
C1orf43_chr1_154201720_154225590	0/0	g0013	4	0	0	3	1	0	C1orf43	chr1	154201720	154225590
C1orf43_chr1_154201720_154225590	0/0	g0014	4	4	0	0	0	0	C1orf43	chr1	154201720	154225590
C1orf43_chr1_154201720_154225590	0/0	g0015	4	3	1	0	0	0	C1orf43	chr1	154201720	154225590
C1orf43_chr1_154201720_154225590	0/0	g0016	3	3	0	0	0	0	C1orf43	chr1	154201720	154225590
C1orf43_chr1_154201720_154225590	0/0	g0017	3	3	0	0	0	0	C1orf43	chr1	154201720	154225590