JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C1orf54_chr1_150267790_150285916	1/0	g0075	1	0	0	0	0	0	C1orf54	chr1	150267790	150285916
C1orf54_chr1_150267790_150285916	0/0	g0076	1	0	1	0	0	0	C1orf54	chr1	150267790	150285916
C1orf54_chr1_150267790_150285916	0/0	g0077	1	0	0	1	0	0	C1orf54	chr1	150267790	150285916
C1orf54_chr1_150267790_150285916	0/0	g0078	1	0	0	1	0	0	C1orf54	chr1	150267790	150285916
C1orf54_chr1_150267790_150285916	0/0	g0079	1	1	0	0	0	0	C1orf54	chr1	150267790	150285916
C1orf54_chr1_150267790_150285916	0/0	g0080	1	0	1	0	0	0	C1orf54	chr1	150267790	150285916
C1orf54_chr1_150267790_150285916	0/0	g0081	1	0	1	0	0	0	C1orf54	chr1	150267790	150285916
C1orf54_chr1_150267790_150285916	0/0	g0082	1	0	0	1	0	0	C1orf54	chr1	150267790	150285916
C1orf54_chr1_150267790_150285916	0/0	g0083	1	0	0	1	0	0	C1orf54	chr1	150267790	150285916
C1orf54_chr1_150267790_150285916	0/0	g0084	1	0	0	1	0	0	C1orf54	chr1	150267790	150285916
C1orf54_chr1_150267790_150285916	0/0	g0085	1	0	0	1	0	0	C1orf54	chr1	150267790	150285916
C1orf54_chr1_150267790_150285916	0/0	g0086	1	1	0	0	0	0	C1orf54	chr1	150267790	150285916
C1orf54_chr1_150267790_150285916	0/0	g0087	1	1	0	0	0	0	C1orf54	chr1	150267790	150285916
C1orf54_chr1_150267790_150285916	0/0	g0088	1	1	0	0	0	0	C1orf54	chr1	150267790	150285916
C1orf56_chr1_151042751_151056420	0/1	g0001	186	22	31	90	9	33	C1orf56	chr1	151042751	151056420
C1orf56_chr1_151042751_151056420	0/0	g0002	88	42	14	18	6	8	C1orf56	chr1	151042751	151056420
C1orf56_chr1_151042751_151056420	0/0	g0003	21	12	7	0	1	1	C1orf56	chr1	151042751	151056420
C1orf56_chr1_151042751_151056420	0/0	g0004	12	6	2	4	0	0	C1orf56	chr1	151042751	151056420
C1orf56_chr1_151042751_151056420	0/0	g0005	11	0	0	11	0	0	C1orf56	chr1	151042751	151056420
C1orf56_chr1_151042751_151056420	0/0	g0006	8	2	0	6	0	0	C1orf56	chr1	151042751	151056420
C1orf56_chr1_151042751_151056420	0/0	g0007	6	6	0	0	0	0	C1orf56	chr1	151042751	151056420
C1orf56_chr1_151042751_151056420	0/0	g0008	3	3	0	0	0	0	C1orf56	chr1	151042751	151056420
C1orf56_chr1_151042751_151056420	0/0	g0009	1	0	0	1	0	0	C1orf56	chr1	151042751	151056420
C1orf56_chr1_151042751_151056420	0/0	g0010	1	1	0	0	0	0	C1orf56	chr1	151042751	151056420
C1orf56_chr1_151042751_151056420	0/0	g0011	1	0	0	0	0	1	C1orf56	chr1	151042751	151056420
C1orf56_chr1_151042751_151056420	0/0	g0012	1	0	1	0	0	0	C1orf56	chr1	151042751	151056420
C1orf56_chr1_151042751_151056420	1/0	g0013	1	0	0	0	0	0	C1orf56	chr1	151042751	151056420
C1orf56_chr1_151042751_151056420	0/0	g0014	1	0	0	0	0	1	C1orf56	chr1	151042751	151056420
C1orf56_chr1_151042751_151056420	0/0	g0015	1	0	1	0	0	0	C1orf56	chr1	151042751	151056420
C1orf74_chr1_209774208_209789559	0/0	g0001	103	12	17	54	4	16	C1orf74	chr1	209774208	209789559
C1orf74_chr1_209774208_209789559	1/1	g0002	97	28	15	42	5	5	C1orf74	chr1	209774208	209789559
C1orf74_chr1_209774208_209789559	0/0	g0003	70	2	11	54	0	3	C1orf74	chr1	209774208	209789559
C1orf74_chr1_209774208_209789559	0/0	g0004	60	19	9	22	4	6	C1orf74	chr1	209774208	209789559
C1orf74_chr1_209774208_209789559	0/0	g0005	54	2	14	24	4	10	C1orf74	chr1	209774208	209789559
C1orf74_chr1_209774208_209789559	0/0	g0006	6	6	0	0	0	0	C1orf74	chr1	209774208	209789559
C1orf74_chr1_209774208_209789559	0/0	g0007	5	0	1	0	1	3	C1orf74	chr1	209774208	209789559
C1orf74_chr1_209774208_209789559	0/0	g0008	5	5	0	0	0	0	C1orf74	chr1	209774208	209789559
C1orf74_chr1_209774208_209789559	0/0	g0009	4	4	0	0	0	0	C1orf74	chr1	209774208	209789559
C1orf74_chr1_209774208_209789559	0/0	g0010	4	0	4	0	0	0	C1orf74	chr1	209774208	209789559
C1orf74_chr1_209774208_209789559	0/0	g0011	4	4	0	0	0	0	C1orf74	chr1	209774208	209789559
C1orf74_chr1_209774208_209789559	0/0	g0012	4	3	1	0	0	0	C1orf74	chr1	209774208	209789559
C1orf74_chr1_209774208_209789559	0/0	g0013	3	0	0	3	0	0	C1orf74	chr1	209774208	209789559
C1orf74_chr1_209774208_209789559	0/0	g0014	2	2	0	0	0	0	C1orf74	chr1	209774208	209789559
C1orf74_chr1_209774208_209789559	0/0	g0015	2	2	0	0	0	0	C1orf74	chr1	209774208	209789559
C1orf74_chr1_209774208_209789559	0/0	g0016	1	1	0	0	0	0	C1orf74	chr1	209774208	209789559
C1orf74_chr1_209774208_209789559	0/0	g0017	1	1	0	0	0	0	C1orf74	chr1	209774208	209789559
C1orf74_chr1_209774208_209789559	0/0	g0018	1	0	0	1	0	0	C1orf74	chr1	209774208	209789559
C1orf74_chr1_209774208_209789559	0/0	g0019	1	0	0	1	0	0	C1orf74	chr1	209774208	209789559
C1orf74_chr1_209774208_209789559	0/0	g0020	1	0	1	0	0	0	C1orf74	chr1	209774208	209789559
C1orf74_chr1_209774208_209789559	0/0	g0021	1	0	0	1	0	0	C1orf74	chr1	209774208	209789559