JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C20orf203_chr20_32626625_32678941	0/0	g0339	1	0	1	0	0	0	C20orf203	chr20	32626625	32678941
C20orf203_chr20_32626625_32678941	0/0	g0340	1	0	0	1	0	0	C20orf203	chr20	32626625	32678941
C20orf203_chr20_32626625_32678941	0/0	g0341	1	1	0	0	0	0	C20orf203	chr20	32626625	32678941
C20orf203_chr20_32626625_32678941	0/0	g0342	1	1	0	0	0	0	C20orf203	chr20	32626625	32678941
C20orf203_chr20_32626625_32678941	0/0	g0343	1	1	0	0	0	0	C20orf203	chr20	32626625	32678941
C20orf204_chr20_64031182_64044001	1/1	g0001	272	52	52	117	13	36	C20orf204	chr20	64031182	64044001
C20orf204_chr20_64031182_64044001	0/0	g0002	42	14	13	6	2	7	C20orf204	chr20	64031182	64044001
C20orf204_chr20_64031182_64044001	0/0	g0003	38	0	3	33	1	1	C20orf204	chr20	64031182	64044001
C20orf204_chr20_64031182_64044001	0/0	g0004	15	14	1	0	0	0	C20orf204	chr20	64031182	64044001
C20orf204_chr20_64031182_64044001	0/0	g0005	7	7	0	0	0	0	C20orf204	chr20	64031182	64044001
C20orf204_chr20_64031182_64044001	0/0	g0006	5	0	0	5	0	0	C20orf204	chr20	64031182	64044001
C20orf204_chr20_64031182_64044001	0/0	g0007	2	0	2	0	0	0	C20orf204	chr20	64031182	64044001
C20orf204_chr20_64031182_64044001	0/0	g0008	2	1	0	0	0	1	C20orf204	chr20	64031182	64044001
C20orf204_chr20_64031182_64044001	0/0	g0009	1	1	0	0	0	0	C20orf204	chr20	64031182	64044001
C20orf204_chr20_64031182_64044001	0/0	g0010	1	1	0	0	0	0	C20orf204	chr20	64031182	64044001
C20orf204_chr20_64031182_64044001	0/0	g0011	1	1	0	0	0	0	C20orf204	chr20	64031182	64044001
C20orf204_chr20_64031182_64044001	0/0	g0012	1	1	0	0	0	0	C20orf204	chr20	64031182	64044001
C20orf204_chr20_64031182_64044001	0/0	g0013	1	0	1	0	0	0	C20orf204	chr20	64031182	64044001
C20orf204_chr20_64031182_64044001	0/0	g0014	1	0	0	1	0	0	C20orf204	chr20	64031182	64044001
C20orf204_chr20_64031182_64044001	0/0	g0015	1	0	0	0	0	1	C20orf204	chr20	64031182	64044001
C20orf204_chr20_64031182_64044001	0/0	g0016	1	1	0	0	0	0	C20orf204	chr20	64031182	64044001
C20orf204_chr20_64031182_64044001	0/0	g0017	1	1	0	0	0	0	C20orf204	chr20	64031182	64044001
C20orf85_chr20_58145902_58166150	0/0	g0001	95	12	16	50	6	11	C20orf85	chr20	58145902	58166150
C20orf85_chr20_58145902_58166150	0/0	g0002	34	17	10	0	1	6	C20orf85	chr20	58145902	58166150
C20orf85_chr20_58145902_58166150	0/0	g0003	9	0	0	8	0	1	C20orf85	chr20	58145902	58166150
C20orf85_chr20_58145902_58166150	0/0	g0004	8	0	2	1	1	4	C20orf85	chr20	58145902	58166150
C20orf85_chr20_58145902_58166150	0/0	g0005	7	0	1	6	0	0	C20orf85	chr20	58145902	58166150
C20orf85_chr20_58145902_58166150	0/0	g0006	6	2	4	0	0	0	C20orf85	chr20	58145902	58166150
C20orf85_chr20_58145902_58166150	0/0	g0007	5	5	0	0	0	0	C20orf85	chr20	58145902	58166150
C20orf85_chr20_58145902_58166150	0/0	g0008	5	0	3	2	0	0	C20orf85	chr20	58145902	58166150
C20orf85_chr20_58145902_58166150	0/0	g0009	5	0	1	3	0	1	C20orf85	chr20	58145902	58166150
C20orf85_chr20_58145902_58166150	0/0	g0010	5	5	0	0	0	0	C20orf85	chr20	58145902	58166150
C20orf85_chr20_58145902_58166150	0/0	g0011	4	0	3	0	0	1	C20orf85	chr20	58145902	58166150
C20orf85_chr20_58145902_58166150	0/0	g0012	4	4	0	0	0	0	C20orf85	chr20	58145902	58166150
C20orf85_chr20_58145902_58166150	0/0	g0013	4	0	0	4	0	0	C20orf85	chr20	58145902	58166150
C20orf85_chr20_58145902_58166150	0/0	g0014	4	4	0	0	0	0	C20orf85	chr20	58145902	58166150
C20orf85_chr20_58145902_58166150	0/0	g0015	4	0	3	0	1	0	C20orf85	chr20	58145902	58166150
C20orf85_chr20_58145902_58166150	1/0	g0016	3	2	0	0	0	0	C20orf85	chr20	58145902	58166150
C20orf85_chr20_58145902_58166150	0/0	g0017	3	3	0	0	0	0	C20orf85	chr20	58145902	58166150
C20orf85_chr20_58145902_58166150	0/0	g0018	3	0	0	3	0	0	C20orf85	chr20	58145902	58166150
C20orf85_chr20_58145902_58166150	0/0	g0019	3	0	0	3	0	0	C20orf85	chr20	58145902	58166150
C20orf85_chr20_58145902_58166150	0/0	g0020	3	0	1	0	2	0	C20orf85	chr20	58145902	58166150
C20orf85_chr20_58145902_58166150	0/0	g0021	3	2	1	0	0	0	C20orf85	chr20	58145902	58166150
C20orf85_chr20_58145902_58166150	0/0	g0022	3	3	0	0	0	0	C20orf85	chr20	58145902	58166150
C20orf85_chr20_58145902_58166150	0/0	g0023	3	2	1	0	0	0	C20orf85	chr20	58145902	58166150
C20orf85_chr20_58145902_58166150	0/0	g0024	3	3	0	0	0	0	C20orf85	chr20	58145902	58166150
C20orf85_chr20_58145902_58166150	0/0	g0025	2	0	1	0	1	0	C20orf85	chr20	58145902	58166150
C20orf85_chr20_58145902_58166150	0/0	g0026	2	0	2	0	0	0	C20orf85	chr20	58145902	58166150
C20orf85_chr20_58145902_58166150	0/0	g0027	2	2	0	0	0	0	C20orf85	chr20	58145902	58166150
C20orf85_chr20_58145902_58166150	0/0	g0028	2	0	2	0	0	0	C20orf85	chr20	58145902	58166150