JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C21orf62_chr21_32785673_32818703	0/0	g0252	1	1	0	0	0	0	C21orf62	chr21	32785673	32818703
C21orf62_chr21_32785673_32818703	0/0	g0253	1	1	0	0	0	0	C21orf62	chr21	32785673	32818703
C21orf62_chr21_32785673_32818703	0/0	g0254	1	0	1	0	0	0	C21orf62	chr21	32785673	32818703
C21orf62_chr21_32785673_32818703	0/0	g0255	1	0	0	0	0	1	C21orf62	chr21	32785673	32818703
C21orf62_chr21_32785673_32818703	0/0	g0256	1	0	0	1	0	0	C21orf62	chr21	32785673	32818703
C21orf62_chr21_32785673_32818703	0/0	g0257	1	0	0	0	1	0	C21orf62	chr21	32785673	32818703
C21orf62_chr21_32785673_32818703	0/0	g0258	1	1	0	0	0	0	C21orf62	chr21	32785673	32818703
C21orf62_chr21_32785673_32818703	0/0	g0259	1	1	0	0	0	0	C21orf62	chr21	32785673	32818703
C21orf62_chr21_32785673_32818703	0/0	g0260	1	1	0	0	0	0	C21orf62	chr21	32785673	32818703
C21orf62_chr21_32785673_32818703	0/0	g0261	1	1	0	0	0	0	C21orf62	chr21	32785673	32818703
C21orf62_chr21_32785673_32818703	0/0	g0262	1	0	1	0	0	0	C21orf62	chr21	32785673	32818703
C21orf62_chr21_32785673_32818703	0/0	g0263	1	1	0	0	0	0	C21orf62	chr21	32785673	32818703
C21orf62_chr21_32785673_32818703	0/0	g0264	1	0	0	1	0	0	C21orf62	chr21	32785673	32818703
C21orf62_chr21_32785673_32818703	0/0	g0265	1	0	0	1	0	0	C21orf62	chr21	32785673	32818703
C21orf62_chr21_32785673_32818703	0/0	g0266	1	1	0	0	0	0	C21orf62	chr21	32785673	32818703
C21orf62_chr21_32785673_32818703	0/0	g0267	1	0	1	0	0	0	C21orf62	chr21	32785673	32818703
C21orf62_chr21_32785673_32818703	0/0	g0268	1	1	0	0	0	0	C21orf62	chr21	32785673	32818703
C21orf62_chr21_32785673_32818703	0/0	g0269	1	1	0	0	0	0	C21orf62	chr21	32785673	32818703
C21orf62_chr21_32785673_32818703	0/0	g0270	1	1	0	0	0	0	C21orf62	chr21	32785673	32818703
C21orf62_chr21_32785673_32818703	0/0	g0271	1	1	0	0	0	0	C21orf62	chr21	32785673	32818703
C21orf62_chr21_32785673_32818703	0/0	g0272	1	1	0	0	0	0	C21orf62	chr21	32785673	32818703
C21orf62_chr21_32785673_32818703	0/0	g0273	1	1	0	0	0	0	C21orf62	chr21	32785673	32818703
C21orf62_chr21_32785673_32818703	0/0	g0274	1	1	0	0	0	0	C21orf62	chr21	32785673	32818703
C21orf62_chr21_32785673_32818703	0/0	g0275	1	1	0	0	0	0	C21orf62	chr21	32785673	32818703
C21orf62_chr21_32785673_32818703	0/0	g0276	1	1	0	0	0	0	C21orf62	chr21	32785673	32818703
C21orf62_chr21_32785673_32818703	0/0	g0277	1	1	0	0	0	0	C21orf62	chr21	32785673	32818703
C21orf62_chr21_32785673_32818703	0/0	g0278	1	0	1	0	0	0	C21orf62	chr21	32785673	32818703
C21orf62_chr21_32785673_32818703	0/0	g0279	1	0	1	0	0	0	C21orf62	chr21	32785673	32818703
C21orf91_chr21_17783974_17824356	0/0	g0001	42	0	16	19	2	5	C21orf91	chr21	17783974	17824356
C21orf91_chr21_17783974_17824356	0/0	g0002	40	1	10	20	3	6	C21orf91	chr21	17783974	17824356
C21orf91_chr21_17783974_17824356	0/0	g0003	14	1	3	9	0	1	C21orf91	chr21	17783974	17824356
C21orf91_chr21_17783974_17824356	0/0	g0004	11	10	0	1	0	0	C21orf91	chr21	17783974	17824356
C21orf91_chr21_17783974_17824356	0/0	g0005	9	0	0	9	0	0	C21orf91	chr21	17783974	17824356
C21orf91_chr21_17783974_17824356	0/0	g0006	7	0	0	7	0	0	C21orf91	chr21	17783974	17824356
C21orf91_chr21_17783974_17824356	0/0	g0007	7	0	0	7	0	0	C21orf91	chr21	17783974	17824356
C21orf91_chr21_17783974_17824356	0/0	g0008	7	4	2	0	0	1	C21orf91	chr21	17783974	17824356
C21orf91_chr21_17783974_17824356	0/0	g0009	7	0	2	3	1	1	C21orf91	chr21	17783974	17824356
C21orf91_chr21_17783974_17824356	1/0	g0010	7	0	3	0	1	2	C21orf91	chr21	17783974	17824356
C21orf91_chr21_17783974_17824356	0/0	g0011	6	0	0	6	0	0	C21orf91	chr21	17783974	17824356
C21orf91_chr21_17783974_17824356	0/0	g0012	5	0	0	4	0	1	C21orf91	chr21	17783974	17824356
C21orf91_chr21_17783974_17824356	0/0	g0013	5	5	0	0	0	0	C21orf91	chr21	17783974	17824356
C21orf91_chr21_17783974_17824356	0/0	g0014	5	0	4	0	1	0	C21orf91	chr21	17783974	17824356
C21orf91_chr21_17783974_17824356	0/0	g0015	4	0	0	3	0	1	C21orf91	chr21	17783974	17824356
C21orf91_chr21_17783974_17824356	0/0	g0016	4	1	1	1	0	1	C21orf91	chr21	17783974	17824356
C21orf91_chr21_17783974_17824356	0/0	g0017	4	0	2	0	0	2	C21orf91	chr21	17783974	17824356
C21orf91_chr21_17783974_17824356	0/0	g0018	4	4	0	0	0	0	C21orf91	chr21	17783974	17824356
C21orf91_chr21_17783974_17824356	0/0	g0019	4	0	0	4	0	0	C21orf91	chr21	17783974	17824356
C21orf91_chr21_17783974_17824356	0/0	g0020	4	0	3	1	0	0	C21orf91	chr21	17783974	17824356
C21orf91_chr21_17783974_17824356	0/0	g0021	4	0	0	3	1	0	C21orf91	chr21	17783974	17824356
C21orf91_chr21_17783974_17824356	0/0	g0022	4	3	1	0	0	0	C21orf91	chr21	17783974	17824356