JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C21orf91_chr21_17783974_17824356	0/0	g0173	1	1	0	0	0	0	C21orf91	chr21	17783974	17824356
C21orf91_chr21_17783974_17824356	0/0	g0174	1	1	0	0	0	0	C21orf91	chr21	17783974	17824356
C21orf91_chr21_17783974_17824356	0/0	g0175	1	1	0	0	0	0	C21orf91	chr21	17783974	17824356
C21orf91_chr21_17783974_17824356	0/0	g0176	1	0	1	0	0	0	C21orf91	chr21	17783974	17824356
C21orf91_chr21_17783974_17824356	0/0	g0177	1	0	0	1	0	0	C21orf91	chr21	17783974	17824356
C21orf91_chr21_17783974_17824356	0/0	g0178	1	0	0	1	0	0	C21orf91	chr21	17783974	17824356
C21orf91_chr21_17783974_17824356	0/0	g0179	1	0	0	0	0	1	C21orf91	chr21	17783974	17824356
C21orf91_chr21_17783974_17824356	0/0	g0180	1	0	0	0	0	1	C21orf91	chr21	17783974	17824356
C21orf91_chr21_17783974_17824356	0/0	g0181	1	0	0	1	0	0	C21orf91	chr21	17783974	17824356
C21orf91_chr21_17783974_17824356	0/0	g0182	1	0	0	1	0	0	C21orf91	chr21	17783974	17824356
C21orf91_chr21_17783974_17824356	0/0	g0183	1	0	0	1	0	0	C21orf91	chr21	17783974	17824356
C21orf91_chr21_17783974_17824356	0/0	g0184	1	0	0	0	0	1	C21orf91	chr21	17783974	17824356
C21orf91_chr21_17783974_17824356	0/0	g0185	1	0	0	1	0	0	C21orf91	chr21	17783974	17824356
C21orf91_chr21_17783974_17824356	0/0	g0186	1	0	0	0	1	0	C21orf91	chr21	17783974	17824356
C21orf91_chr21_17783974_17824356	0/0	g0187	1	1	0	0	0	0	C21orf91	chr21	17783974	17824356
C22orf15_chr22_23757990_23770863	0/1	g0001	219	36	54	96	9	23	C22orf15	chr22	23757990	23770863
C22orf15_chr22_23757990_23770863	0/0	g0002	74	3	7	54	2	8	C22orf15	chr22	23757990	23770863
C22orf15_chr22_23757990_23770863	0/0	g0003	59	19	13	22	3	2	C22orf15	chr22	23757990	23770863
C22orf15_chr22_23757990_23770863	0/0	g0004	36	7	2	13	2	12	C22orf15	chr22	23757990	23770863
C22orf15_chr22_23757990_23770863	0/0	g0005	20	19	1	0	0	0	C22orf15	chr22	23757990	23770863
C22orf15_chr22_23757990_23770863	0/0	g0006	11	11	0	0	0	0	C22orf15	chr22	23757990	23770863
C22orf15_chr22_23757990_23770863	0/0	g0007	2	1	1	0	0	0	C22orf15	chr22	23757990	23770863
C22orf15_chr22_23757990_23770863	0/0	g0008	2	0	2	0	0	0	C22orf15	chr22	23757990	23770863
C22orf15_chr22_23757990_23770863	0/0	g0009	1	0	0	1	0	0	C22orf15	chr22	23757990	23770863
C22orf15_chr22_23757990_23770863	0/0	g0010	1	0	0	1	0	0	C22orf15	chr22	23757990	23770863
C22orf15_chr22_23757990_23770863	0/0	g0011	1	0	0	0	0	1	C22orf15	chr22	23757990	23770863
C22orf15_chr22_23757990_23770863	0/0	g0012	1	0	0	0	0	1	C22orf15	chr22	23757990	23770863
C22orf15_chr22_23757990_23770863	1/0	g0013	1	0	0	0	0	0	C22orf15	chr22	23757990	23770863
C22orf15_chr22_23757990_23770863	0/0	g0014	1	0	0	1	0	0	C22orf15	chr22	23757990	23770863
C22orf15_chr22_23757990_23770863	0/0	g0015	1	0	0	0	0	1	C22orf15	chr22	23757990	23770863
C22orf15_chr22_23757990_23770863	0/0	g0016	1	0	0	1	0	0	C22orf15	chr22	23757990	23770863
C22orf15_chr22_23757990_23770863	0/0	g0017	1	0	0	1	0	0	C22orf15	chr22	23757990	23770863
C22orf23_chr22_37938050_37958601	0/0	g0001	24	2	2	19	0	1	C22orf23	chr22	37938050	37958601
C22orf23_chr22_37938050_37958601	0/0	g0002	21	4	3	11	1	2	C22orf23	chr22	37938050	37958601
C22orf23_chr22_37938050_37958601	0/1	g0003	14	0	9	0	2	2	C22orf23	chr22	37938050	37958601
C22orf23_chr22_37938050_37958601	0/0	g0004	8	0	4	3	0	1	C22orf23	chr22	37938050	37958601
C22orf23_chr22_37938050_37958601	0/0	g0005	8	0	0	6	1	1	C22orf23	chr22	37938050	37958601
C22orf23_chr22_37938050_37958601	0/0	g0006	7	0	0	5	0	2	C22orf23	chr22	37938050	37958601
C22orf23_chr22_37938050_37958601	0/0	g0007	7	0	2	4	1	0	C22orf23	chr22	37938050	37958601
C22orf23_chr22_37938050_37958601	0/0	g0008	6	0	1	4	0	1	C22orf23	chr22	37938050	37958601
C22orf23_chr22_37938050_37958601	0/0	g0009	6	0	2	2	0	2	C22orf23	chr22	37938050	37958601
C22orf23_chr22_37938050_37958601	0/0	g0010	6	0	1	4	0	1	C22orf23	chr22	37938050	37958601
C22orf23_chr22_37938050_37958601	0/0	g0011	5	2	0	3	0	0	C22orf23	chr22	37938050	37958601
C22orf23_chr22_37938050_37958601	0/0	g0012	5	5	0	0	0	0	C22orf23	chr22	37938050	37958601
C22orf23_chr22_37938050_37958601	0/0	g0013	4	4	0	0	0	0	C22orf23	chr22	37938050	37958601
C22orf23_chr22_37938050_37958601	0/0	g0014	4	4	0	0	0	0	C22orf23	chr22	37938050	37958601
C22orf23_chr22_37938050_37958601	0/0	g0015	4	3	0	0	1	0	C22orf23	chr22	37938050	37958601
C22orf23_chr22_37938050_37958601	0/0	g0016	3	0	0	2	0	1	C22orf23	chr22	37938050	37958601
C22orf23_chr22_37938050_37958601	0/0	g0017	3	1	0	2	0	0	C22orf23	chr22	37938050	37958601
C22orf23_chr22_37938050_37958601	0/0	g0018	3	0	3	0	0	0	C22orf23	chr22	37938050	37958601