JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C22orf23_chr22_37938050_37958601	0/0	g0219	1	0	0	1	0	0	C22orf23	chr22	37938050	37958601
C22orf23_chr22_37938050_37958601	0/0	g0220	1	0	1	0	0	0	C22orf23	chr22	37938050	37958601
C22orf23_chr22_37938050_37958601	0/0	g0221	1	0	1	0	0	0	C22orf23	chr22	37938050	37958601
C22orf23_chr22_37938050_37958601	0/0	g0222	1	0	0	1	0	0	C22orf23	chr22	37938050	37958601
C22orf23_chr22_37938050_37958601	1/0	g0223	1	0	0	0	0	0	C22orf23	chr22	37938050	37958601
C22orf23_chr22_37938050_37958601	0/0	g0224	1	1	0	0	0	0	C22orf23	chr22	37938050	37958601
C22orf23_chr22_37938050_37958601	0/0	g0225	1	1	0	0	0	0	C22orf23	chr22	37938050	37958601
C22orf23_chr22_37938050_37958601	0/0	g0226	1	1	0	0	0	0	C22orf23	chr22	37938050	37958601
C22orf23_chr22_37938050_37958601	0/0	g0227	1	1	0	0	0	0	C22orf23	chr22	37938050	37958601
C22orf23_chr22_37938050_37958601	0/0	g0228	1	1	0	0	0	0	C22orf23	chr22	37938050	37958601
C22orf23_chr22_37938050_37958601	0/0	g0229	1	0	0	1	0	0	C22orf23	chr22	37938050	37958601
C22orf31_chr22_29053672_29066831	0/0	g0001	54	8	17	23	2	4	C22orf31	chr22	29053672	29066831
C22orf31_chr22_29053672_29066831	0/0	g0002	36	0	5	27	0	4	C22orf31	chr22	29053672	29066831
C22orf31_chr22_29053672_29066831	0/0	g0003	36	1	6	23	0	6	C22orf31	chr22	29053672	29066831
C22orf31_chr22_29053672_29066831	0/0	g0004	35	0	14	15	2	4	C22orf31	chr22	29053672	29066831
C22orf31_chr22_29053672_29066831	0/0	g0005	26	0	5	20	0	1	C22orf31	chr22	29053672	29066831
C22orf31_chr22_29053672_29066831	0/0	g0006	17	4	1	12	0	0	C22orf31	chr22	29053672	29066831
C22orf31_chr22_29053672_29066831	1/0	g0007	12	1	2	7	1	0	C22orf31	chr22	29053672	29066831
C22orf31_chr22_29053672_29066831	0/0	g0008	11	9	0	2	0	0	C22orf31	chr22	29053672	29066831
C22orf31_chr22_29053672_29066831	0/0	g0009	11	0	1	5	3	2	C22orf31	chr22	29053672	29066831
C22orf31_chr22_29053672_29066831	0/0	g0010	10	0	0	7	1	2	C22orf31	chr22	29053672	29066831
C22orf31_chr22_29053672_29066831	0/0	g0011	10	1	2	4	0	3	C22orf31	chr22	29053672	29066831
C22orf31_chr22_29053672_29066831	0/0	g0012	7	1	4	0	1	1	C22orf31	chr22	29053672	29066831
C22orf31_chr22_29053672_29066831	0/0	g0013	7	0	0	7	0	0	C22orf31	chr22	29053672	29066831
C22orf31_chr22_29053672_29066831	0/0	g0014	6	0	2	4	0	0	C22orf31	chr22	29053672	29066831
C22orf31_chr22_29053672_29066831	0/0	g0015	6	0	0	6	0	0	C22orf31	chr22	29053672	29066831
C22orf31_chr22_29053672_29066831	0/0	g0016	6	2	0	4	0	0	C22orf31	chr22	29053672	29066831
C22orf31_chr22_29053672_29066831	0/0	g0017	6	6	0	0	0	0	C22orf31	chr22	29053672	29066831
C22orf31_chr22_29053672_29066831	0/0	g0018	6	0	0	2	2	2	C22orf31	chr22	29053672	29066831
C22orf31_chr22_29053672_29066831	0/0	g0019	5	0	0	5	0	0	C22orf31	chr22	29053672	29066831
C22orf31_chr22_29053672_29066831	0/0	g0020	4	0	2	0	2	0	C22orf31	chr22	29053672	29066831
C22orf31_chr22_29053672_29066831	0/0	g0021	4	0	2	2	0	0	C22orf31	chr22	29053672	29066831
C22orf31_chr22_29053672_29066831	0/0	g0022	4	0	0	4	0	0	C22orf31	chr22	29053672	29066831
C22orf31_chr22_29053672_29066831	0/0	g0023	4	0	0	4	0	0	C22orf31	chr22	29053672	29066831
C22orf31_chr22_29053672_29066831	0/0	g0024	4	0	0	3	0	1	C22orf31	chr22	29053672	29066831
C22orf31_chr22_29053672_29066831	0/0	g0025	3	0	0	3	0	0	C22orf31	chr22	29053672	29066831
C22orf31_chr22_29053672_29066831	0/0	g0026	3	0	0	3	0	0	C22orf31	chr22	29053672	29066831
C22orf31_chr22_29053672_29066831	0/0	g0027	3	3	0	0	0	0	C22orf31	chr22	29053672	29066831
C22orf31_chr22_29053672_29066831	0/0	g0028	3	0	0	3	0	0	C22orf31	chr22	29053672	29066831
C22orf31_chr22_29053672_29066831	0/0	g0029	3	0	0	3	0	0	C22orf31	chr22	29053672	29066831
C22orf31_chr22_29053672_29066831	0/0	g0030	3	1	0	2	0	0	C22orf31	chr22	29053672	29066831
C22orf31_chr22_29053672_29066831	0/0	g0031	3	0	0	2	0	1	C22orf31	chr22	29053672	29066831
C22orf31_chr22_29053672_29066831	0/0	g0032	3	0	1	0	0	2	C22orf31	chr22	29053672	29066831
C22orf31_chr22_29053672_29066831	0/0	g0033	3	2	0	0	0	1	C22orf31	chr22	29053672	29066831
C22orf31_chr22_29053672_29066831	0/0	g0034	3	3	0	0	0	0	C22orf31	chr22	29053672	29066831
C22orf31_chr22_29053672_29066831	0/1	g0035	3	0	0	0	0	2	C22orf31	chr22	29053672	29066831
C22orf31_chr22_29053672_29066831	0/0	g0036	2	2	0	0	0	0	C22orf31	chr22	29053672	29066831
C22orf31_chr22_29053672_29066831	0/0	g0037	2	0	1	0	0	1	C22orf31	chr22	29053672	29066831
C22orf31_chr22_29053672_29066831	0/0	g0038	2	0	2	0	0	0	C22orf31	chr22	29053672	29066831
C22orf31_chr22_29053672_29066831	0/0	g0039	2	2	0	0	0	0	C22orf31	chr22	29053672	29066831