JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C2orf73_chr2_54325884_54366581	0/0	g0139	1	0	1	0	0	0	C2orf73	chr2	54325884	54366581
C2orf73_chr2_54325884_54366581	0/0	g0140	1	0	0	1	0	0	C2orf73	chr2	54325884	54366581
C2orf73_chr2_54325884_54366581	0/0	g0141	1	0	0	1	0	0	C2orf73	chr2	54325884	54366581
C2orf73_chr2_54325884_54366581	0/0	g0142	1	0	0	1	0	0	C2orf73	chr2	54325884	54366581
C2orf73_chr2_54325884_54366581	0/0	g0143	1	0	0	1	0	0	C2orf73	chr2	54325884	54366581
C2orf73_chr2_54325884_54366581	0/0	g0144	1	1	0	0	0	0	C2orf73	chr2	54325884	54366581
C2orf73_chr2_54325884_54366581	0/0	g0145	1	0	0	0	0	1	C2orf73	chr2	54325884	54366581
C2orf73_chr2_54325884_54366581	0/0	g0146	1	0	0	0	1	0	C2orf73	chr2	54325884	54366581
C2orf73_chr2_54325884_54366581	0/0	g0147	1	0	1	0	0	0	C2orf73	chr2	54325884	54366581
C2orf73_chr2_54325884_54366581	0/0	g0148	1	1	0	0	0	0	C2orf73	chr2	54325884	54366581
C2orf73_chr2_54325884_54366581	0/0	g0149	1	1	0	0	0	0	C2orf73	chr2	54325884	54366581
C2orf73_chr2_54325884_54366581	0/0	g0150	1	1	0	0	0	0	C2orf73	chr2	54325884	54366581
C2orf73_chr2_54325884_54366581	0/0	g0151	1	1	0	0	0	0	C2orf73	chr2	54325884	54366581
C2orf73_chr2_54325884_54366581	0/0	g0152	1	0	1	0	0	0	C2orf73	chr2	54325884	54366581
C2orf73_chr2_54325884_54366581	0/0	g0153	1	1	0	0	0	0	C2orf73	chr2	54325884	54366581
C2orf73_chr2_54325884_54366581	0/0	g0154	1	0	0	0	1	0	C2orf73	chr2	54325884	54366581
C2orf73_chr2_54325884_54366581	0/0	g0155	1	0	1	0	0	0	C2orf73	chr2	54325884	54366581
C2orf73_chr2_54325884_54366581	0/0	g0156	1	0	0	0	0	1	C2orf73	chr2	54325884	54366581
C2orf73_chr2_54325884_54366581	0/0	g0157	1	0	0	0	0	1	C2orf73	chr2	54325884	54366581
C2orf73_chr2_54325884_54366581	0/0	g0158	1	0	0	0	0	1	C2orf73	chr2	54325884	54366581
C2orf73_chr2_54325884_54366581	0/0	g0159	1	0	0	0	0	1	C2orf73	chr2	54325884	54366581
C2orf73_chr2_54325884_54366581	0/0	g0160	1	0	0	0	0	1	C2orf73	chr2	54325884	54366581
C2orf73_chr2_54325884_54366581	0/0	g0161	1	1	0	0	0	0	C2orf73	chr2	54325884	54366581
C2orf73_chr2_54325884_54366581	0/0	g0162	1	0	1	0	0	0	C2orf73	chr2	54325884	54366581
C2orf73_chr2_54325884_54366581	0/0	g0163	1	1	0	0	0	0	C2orf73	chr2	54325884	54366581
C2orf73_chr2_54325884_54366581	0/0	g0164	1	1	0	0	0	0	C2orf73	chr2	54325884	54366581
C2orf73_chr2_54325884_54366581	0/0	g0165	1	1	0	0	0	0	C2orf73	chr2	54325884	54366581
C2orf73_chr2_54325884_54366581	0/0	g0166	1	0	1	0	0	0	C2orf73	chr2	54325884	54366581
C2orf73_chr2_54325884_54366581	0/0	g0167	1	1	0	0	0	0	C2orf73	chr2	54325884	54366581
C2orf73_chr2_54325884_54366581	0/0	g0168	1	1	0	0	0	0	C2orf73	chr2	54325884	54366581
C2orf74_chr2_61157188_61169828	0/0	g0001	128	25	23	59	5	16	C2orf74	chr2	61157188	61169828
C2orf74_chr2_61157188_61169828	1/0	g0002	119	19	26	54	3	16	C2orf74	chr2	61157188	61169828
C2orf74_chr2_61157188_61169828	0/1	g0003	109	35	14	51	3	5	C2orf74	chr2	61157188	61169828
C2orf74_chr2_61157188_61169828	0/0	g0004	16	1	7	1	2	5	C2orf74	chr2	61157188	61169828
C2orf74_chr2_61157188_61169828	0/0	g0005	10	4	1	4	1	0	C2orf74	chr2	61157188	61169828
C2orf74_chr2_61157188_61169828	0/0	g0006	7	0	1	6	0	0	C2orf74	chr2	61157188	61169828
C2orf74_chr2_61157188_61169828	0/0	g0007	6	6	0	0	0	0	C2orf74	chr2	61157188	61169828
C2orf74_chr2_61157188_61169828	0/0	g0008	5	0	3	2	0	0	C2orf74	chr2	61157188	61169828
C2orf74_chr2_61157188_61169828	0/0	g0009	3	0	3	0	0	0	C2orf74	chr2	61157188	61169828
C2orf74_chr2_61157188_61169828	0/0	g0010	2	0	2	0	0	0	C2orf74	chr2	61157188	61169828
C2orf74_chr2_61157188_61169828	0/0	g0011	2	0	0	2	0	0	C2orf74	chr2	61157188	61169828
C2orf74_chr2_61157188_61169828	0/0	g0012	2	2	0	0	0	0	C2orf74	chr2	61157188	61169828
C2orf74_chr2_61157188_61169828	0/0	g0013	2	2	0	0	0	0	C2orf74	chr2	61157188	61169828
C2orf74_chr2_61157188_61169828	0/0	g0014	2	0	0	2	0	0	C2orf74	chr2	61157188	61169828
C2orf74_chr2_61157188_61169828	0/0	g0015	1	1	0	0	0	0	C2orf74	chr2	61157188	61169828
C2orf74_chr2_61157188_61169828	0/0	g0016	1	0	1	0	0	0	C2orf74	chr2	61157188	61169828
C2orf74_chr2_61157188_61169828	0/0	g0017	1	0	1	0	0	0	C2orf74	chr2	61157188	61169828
C2orf74_chr2_61157188_61169828	0/0	g0018	1	0	0	0	0	1	C2orf74	chr2	61157188	61169828
C2orf74_chr2_61157188_61169828	0/0	g0019	1	1	0	0	0	0	C2orf74	chr2	61157188	61169828
C2orf74_chr2_61157188_61169828	0/0	g0020	1	0	0	1	0	0	C2orf74	chr2	61157188	61169828