JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C3orf20_chr3_14670141_14778036	0/0	g0343	1	0	0	0	0	1	C3orf20	chr3	14670141	14778036
C3orf20_chr3_14670141_14778036	0/0	g0344	1	0	0	1	0	0	C3orf20	chr3	14670141	14778036
C3orf20_chr3_14670141_14778036	0/0	g0345	1	0	0	1	0	0	C3orf20	chr3	14670141	14778036
C3orf20_chr3_14670141_14778036	0/0	g0346	1	0	0	0	0	1	C3orf20	chr3	14670141	14778036
C3orf20_chr3_14670141_14778036	0/0	g0347	1	0	0	0	0	1	C3orf20	chr3	14670141	14778036
C3orf20_chr3_14670141_14778036	0/0	g0348	1	0	0	1	0	0	C3orf20	chr3	14670141	14778036
C3orf20_chr3_14670141_14778036	0/0	g0349	1	1	0	0	0	0	C3orf20	chr3	14670141	14778036
C3orf20_chr3_14670141_14778036	0/0	g0350	1	1	0	0	0	0	C3orf20	chr3	14670141	14778036
C3orf20_chr3_14670141_14778036	0/0	g0351	1	0	0	1	0	0	C3orf20	chr3	14670141	14778036
C3orf20_chr3_14670141_14778036	0/0	g0352	1	0	0	1	0	0	C3orf20	chr3	14670141	14778036
C3orf20_chr3_14670141_14778036	0/0	g0353	1	0	1	0	0	0	C3orf20	chr3	14670141	14778036
C3orf20_chr3_14670141_14778036	0/0	g0354	1	0	1	0	0	0	C3orf20	chr3	14670141	14778036
C3orf20_chr3_14670141_14778036	0/0	g0355	1	0	0	1	0	0	C3orf20	chr3	14670141	14778036
C3orf20_chr3_14670141_14778036	0/0	g0356	1	0	0	0	1	0	C3orf20	chr3	14670141	14778036
C3orf20_chr3_14670141_14778036	0/0	g0357	1	1	0	0	0	0	C3orf20	chr3	14670141	14778036
C3orf20_chr3_14670141_14778036	0/0	g0358	1	1	0	0	0	0	C3orf20	chr3	14670141	14778036
C3orf20_chr3_14670141_14778036	0/0	g0359	1	1	0	0	0	0	C3orf20	chr3	14670141	14778036
C3orf20_chr3_14670141_14778036	0/0	g0360	1	1	0	0	0	0	C3orf20	chr3	14670141	14778036
C3orf20_chr3_14670141_14778036	0/0	g0361	1	0	0	0	1	0	C3orf20	chr3	14670141	14778036
C3orf20_chr3_14670141_14778036	0/0	g0362	1	0	0	1	0	0	C3orf20	chr3	14670141	14778036
C3orf20_chr3_14670141_14778036	0/0	g0363	1	0	1	0	0	0	C3orf20	chr3	14670141	14778036
C3orf20_chr3_14670141_14778036	0/0	g0364	1	0	0	0	0	1	C3orf20	chr3	14670141	14778036
C3orf20_chr3_14670141_14778036	0/0	g0365	1	0	0	1	0	0	C3orf20	chr3	14670141	14778036
C3orf20_chr3_14670141_14778036	0/0	g0366	1	0	0	1	0	0	C3orf20	chr3	14670141	14778036
C3orf20_chr3_14670141_14778036	0/0	g0367	1	0	0	1	0	0	C3orf20	chr3	14670141	14778036
C3orf20_chr3_14670141_14778036	0/0	g0368	1	0	0	1	0	0	C3orf20	chr3	14670141	14778036
C3orf20_chr3_14670141_14778036	0/0	g0369	1	0	1	0	0	0	C3orf20	chr3	14670141	14778036
C3orf20_chr3_14670141_14778036	0/0	g0370	1	0	1	0	0	0	C3orf20	chr3	14670141	14778036
C3orf20_chr3_14670141_14778036	0/0	g0371	1	0	0	0	0	1	C3orf20	chr3	14670141	14778036
C3orf20_chr3_14670141_14778036	0/0	g0372	1	0	0	1	0	0	C3orf20	chr3	14670141	14778036
C3orf20_chr3_14670141_14778036	0/0	g0373	1	0	0	1	0	0	C3orf20	chr3	14670141	14778036
C3orf22_chr3_126544692_126563932	0/0	g0001	115	8	31	55	4	17	C3orf22	chr3	126544692	126563932
C3orf22_chr3_126544692_126563932	0/0	g0002	27	1	9	16	0	1	C3orf22	chr3	126544692	126563932
C3orf22_chr3_126544692_126563932	0/0	g0003	18	0	0	18	0	0	C3orf22	chr3	126544692	126563932
C3orf22_chr3_126544692_126563932	0/0	g0004	15	5	2	5	0	3	C3orf22	chr3	126544692	126563932
C3orf22_chr3_126544692_126563932	0/0	g0005	8	0	0	8	0	0	C3orf22	chr3	126544692	126563932
C3orf22_chr3_126544692_126563932	0/0	g0006	8	3	0	3	0	2	C3orf22	chr3	126544692	126563932
C3orf22_chr3_126544692_126563932	0/0	g0007	8	8	0	0	0	0	C3orf22	chr3	126544692	126563932
C3orf22_chr3_126544692_126563932	0/0	g0008	8	0	3	5	0	0	C3orf22	chr3	126544692	126563932
C3orf22_chr3_126544692_126563932	0/0	g0009	8	8	0	0	0	0	C3orf22	chr3	126544692	126563932
C3orf22_chr3_126544692_126563932	0/0	g0010	7	7	0	0	0	0	C3orf22	chr3	126544692	126563932
C3orf22_chr3_126544692_126563932	0/0	g0011	7	0	1	6	0	0	C3orf22	chr3	126544692	126563932
C3orf22_chr3_126544692_126563932	0/0	g0012	6	0	0	6	0	0	C3orf22	chr3	126544692	126563932
C3orf22_chr3_126544692_126563932	0/0	g0013	6	0	2	2	1	1	C3orf22	chr3	126544692	126563932
C3orf22_chr3_126544692_126563932	0/0	g0014	5	5	0	0	0	0	C3orf22	chr3	126544692	126563932
C3orf22_chr3_126544692_126563932	0/0	g0015	5	0	0	3	0	2	C3orf22	chr3	126544692	126563932
C3orf22_chr3_126544692_126563932	0/0	g0016	5	5	0	0	0	0	C3orf22	chr3	126544692	126563932
C3orf22_chr3_126544692_126563932	0/0	g0017	5	0	1	2	1	1	C3orf22	chr3	126544692	126563932
C3orf22_chr3_126544692_126563932	0/0	g0018	5	5	0	0	0	0	C3orf22	chr3	126544692	126563932
C3orf22_chr3_126544692_126563932	0/0	g0019	4	3	1	0	0	0	C3orf22	chr3	126544692	126563932