JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C3orf33_chr3_155757617_155811278	0/0	g0356	1	0	0	1	0	0	C3orf33	chr3	155757617	155811278
C3orf33_chr3_155757617_155811278	0/0	g0357	1	0	0	1	0	0	C3orf33	chr3	155757617	155811278
C3orf33_chr3_155757617_155811278	0/0	g0358	1	0	0	0	0	1	C3orf33	chr3	155757617	155811278
C3orf33_chr3_155757617_155811278	0/0	g0359	1	0	0	1	0	0	C3orf33	chr3	155757617	155811278
C3orf33_chr3_155757617_155811278	0/0	g0360	1	0	0	1	0	0	C3orf33	chr3	155757617	155811278
C3orf33_chr3_155757617_155811278	0/0	g0361	1	0	0	1	0	0	C3orf33	chr3	155757617	155811278
C3orf33_chr3_155757617_155811278	0/0	g0362	1	0	0	1	0	0	C3orf33	chr3	155757617	155811278
C3orf33_chr3_155757617_155811278	0/0	g0363	1	0	0	1	0	0	C3orf33	chr3	155757617	155811278
C3orf33_chr3_155757617_155811278	0/0	g0364	1	0	0	0	0	1	C3orf33	chr3	155757617	155811278
C3orf33_chr3_155757617_155811278	0/0	g0365	1	0	0	0	0	1	C3orf33	chr3	155757617	155811278
C3orf33_chr3_155757617_155811278	0/0	g0366	1	0	0	1	0	0	C3orf33	chr3	155757617	155811278
C3orf33_chr3_155757617_155811278	0/0	g0367	1	1	0	0	0	0	C3orf33	chr3	155757617	155811278
C3orf33_chr3_155757617_155811278	0/0	g0368	1	1	0	0	0	0	C3orf33	chr3	155757617	155811278
C3orf33_chr3_155757617_155811278	0/0	g0369	1	0	1	0	0	0	C3orf33	chr3	155757617	155811278
C3orf33_chr3_155757617_155811278	0/0	g0370	1	1	0	0	0	0	C3orf33	chr3	155757617	155811278
C3orf33_chr3_155757617_155811278	0/0	g0371	1	1	0	0	0	0	C3orf33	chr3	155757617	155811278
C3orf33_chr3_155757617_155811278	0/0	g0372	1	0	1	0	0	0	C3orf33	chr3	155757617	155811278
C3orf33_chr3_155757617_155811278	0/0	g0373	1	0	1	0	0	0	C3orf33	chr3	155757617	155811278
C3orf33_chr3_155757617_155811278	0/0	g0374	1	1	0	0	0	0	C3orf33	chr3	155757617	155811278
C3orf33_chr3_155757617_155811278	0/0	g0375	1	1	0	0	0	0	C3orf33	chr3	155757617	155811278
C3orf33_chr3_155757617_155811278	0/0	g0376	1	1	0	0	0	0	C3orf33	chr3	155757617	155811278
C3orf33_chr3_155757617_155811278	0/0	g0377	1	1	0	0	0	0	C3orf33	chr3	155757617	155811278
C3orf33_chr3_155757617_155811278	0/0	g0378	1	1	0	0	0	0	C3orf33	chr3	155757617	155811278
C3orf33_chr3_155757617_155811278	0/0	g0379	1	1	0	0	0	0	C3orf33	chr3	155757617	155811278
C3orf33_chr3_155757617_155811278	0/0	g0380	1	1	0	0	0	0	C3orf33	chr3	155757617	155811278
C3orf33_chr3_155757617_155811278	0/0	g0381	1	1	0	0	0	0	C3orf33	chr3	155757617	155811278
C3orf33_chr3_155757617_155811278	0/0	g0382	1	1	0	0	0	0	C3orf33	chr3	155757617	155811278
C3orf33_chr3_155757617_155811278	0/0	g0383	1	1	0	0	0	0	C3orf33	chr3	155757617	155811278
C3orf33_chr3_155757617_155811278	0/0	g0384	1	1	0	0	0	0	C3orf33	chr3	155757617	155811278
C3orf33_chr3_155757617_155811278	0/0	g0385	1	1	0	0	0	0	C3orf33	chr3	155757617	155811278
C3orf33_chr3_155757617_155811278	0/0	g0386	1	1	0	0	0	0	C3orf33	chr3	155757617	155811278
C3orf33_chr3_155757617_155811278	0/0	g0387	1	1	0	0	0	0	C3orf33	chr3	155757617	155811278
C3orf33_chr3_155757617_155811278	0/0	g0388	1	1	0	0	0	0	C3orf33	chr3	155757617	155811278
C3orf33_chr3_155757617_155811278	0/0	g0389	1	1	0	0	0	0	C3orf33	chr3	155757617	155811278
C3orf33_chr3_155757617_155811278	0/0	g0390	1	1	0	0	0	0	C3orf33	chr3	155757617	155811278
C3orf38_chr3_88144959_88162965	0/1	g0001	155	17	29	84	8	16	C3orf38	chr3	88144959	88162965
C3orf38_chr3_88144959_88162965	0/0	g0002	41	17	4	18	0	2	C3orf38	chr3	88144959	88162965
C3orf38_chr3_88144959_88162965	0/0	g0003	16	9	3	4	0	0	C3orf38	chr3	88144959	88162965
C3orf38_chr3_88144959_88162965	0/0	g0004	10	0	0	10	0	0	C3orf38	chr3	88144959	88162965
C3orf38_chr3_88144959_88162965	1/0	g0005	9	0	3	3	1	1	C3orf38	chr3	88144959	88162965
C3orf38_chr3_88144959_88162965	0/0	g0006	9	8	1	0	0	0	C3orf38	chr3	88144959	88162965
C3orf38_chr3_88144959_88162965	0/0	g0007	7	7	0	0	0	0	C3orf38	chr3	88144959	88162965
C3orf38_chr3_88144959_88162965	0/0	g0008	7	0	2	2	1	2	C3orf38	chr3	88144959	88162965
C3orf38_chr3_88144959_88162965	0/0	g0009	5	5	0	0	0	0	C3orf38	chr3	88144959	88162965
C3orf38_chr3_88144959_88162965	0/0	g0010	5	5	0	0	0	0	C3orf38	chr3	88144959	88162965
C3orf38_chr3_88144959_88162965	0/0	g0011	4	0	0	4	0	0	C3orf38	chr3	88144959	88162965
C3orf38_chr3_88144959_88162965	0/0	g0012	4	0	4	0	0	0	C3orf38	chr3	88144959	88162965
C3orf38_chr3_88144959_88162965	0/0	g0013	4	4	0	0	0	0	C3orf38	chr3	88144959	88162965
C3orf38_chr3_88144959_88162965	0/0	g0014	3	0	0	3	0	0	C3orf38	chr3	88144959	88162965
C3orf38_chr3_88144959_88162965	0/0	g0015	2	1	1	0	0	0	C3orf38	chr3	88144959	88162965