JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C3orf52_chr3_112081389_112123210	0/0	g0194	1	0	0	1	0	0	C3orf52	chr3	112081389	112123210
C3orf52_chr3_112081389_112123210	0/0	g0195	1	0	0	1	0	0	C3orf52	chr3	112081389	112123210
C3orf52_chr3_112081389_112123210	0/0	g0196	1	0	0	1	0	0	C3orf52	chr3	112081389	112123210
C3orf52_chr3_112081389_112123210	0/0	g0197	1	0	0	1	0	0	C3orf52	chr3	112081389	112123210
C3orf52_chr3_112081389_112123210	0/0	g0198	1	0	0	1	0	0	C3orf52	chr3	112081389	112123210
C3orf52_chr3_112081389_112123210	0/0	g0199	1	0	0	0	0	1	C3orf52	chr3	112081389	112123210
C3orf52_chr3_112081389_112123210	0/0	g0200	1	0	0	1	0	0	C3orf52	chr3	112081389	112123210
C3orf52_chr3_112081389_112123210	0/0	g0201	1	0	0	0	0	1	C3orf52	chr3	112081389	112123210
C3orf52_chr3_112081389_112123210	0/0	g0202	1	0	0	1	0	0	C3orf52	chr3	112081389	112123210
C3orf52_chr3_112081389_112123210	0/0	g0203	1	0	0	1	0	0	C3orf52	chr3	112081389	112123210
C3orf52_chr3_112081389_112123210	0/0	g0204	1	0	0	0	0	1	C3orf52	chr3	112081389	112123210
C3orf52_chr3_112081389_112123210	0/0	g0205	1	0	1	0	0	0	C3orf52	chr3	112081389	112123210
C3orf52_chr3_112081389_112123210	0/0	g0206	1	0	0	1	0	0	C3orf52	chr3	112081389	112123210
C3orf52_chr3_112081389_112123210	0/0	g0207	1	0	1	0	0	0	C3orf52	chr3	112081389	112123210
C3orf52_chr3_112081389_112123210	0/0	g0208	1	1	0	0	0	0	C3orf52	chr3	112081389	112123210
C3orf52_chr3_112081389_112123210	0/0	g0209	1	1	0	0	0	0	C3orf52	chr3	112081389	112123210
C3orf52_chr3_112081389_112123210	0/0	g0210	1	1	0	0	0	0	C3orf52	chr3	112081389	112123210
C3orf52_chr3_112081389_112123210	0/0	g0211	1	0	1	0	0	0	C3orf52	chr3	112081389	112123210
C3orf52_chr3_112081389_112123210	0/0	g0212	1	1	0	0	0	0	C3orf52	chr3	112081389	112123210
C3orf52_chr3_112081389_112123210	0/0	g0213	1	0	0	0	0	1	C3orf52	chr3	112081389	112123210
C3orf52_chr3_112081389_112123210	0/0	g0214	1	0	1	0	0	0	C3orf52	chr3	112081389	112123210
C3orf52_chr3_112081389_112123210	0/0	g0215	1	0	0	1	0	0	C3orf52	chr3	112081389	112123210
C3orf52_chr3_112081389_112123210	0/0	g0216	1	0	1	0	0	0	C3orf52	chr3	112081389	112123210
C3orf62_chr3_49263596_49282232	0/0	g0001	23	0	2	20	0	1	C3orf62	chr3	49263596	49282232
C3orf62_chr3_49263596_49282232	0/0	g0002	22	0	8	11	3	0	C3orf62	chr3	49263596	49282232
C3orf62_chr3_49263596_49282232	0/0	g0003	20	4	3	10	1	2	C3orf62	chr3	49263596	49282232
C3orf62_chr3_49263596_49282232	0/0	g0004	12	3	3	3	0	3	C3orf62	chr3	49263596	49282232
C3orf62_chr3_49263596_49282232	0/0	g0005	11	0	4	4	0	3	C3orf62	chr3	49263596	49282232
C3orf62_chr3_49263596_49282232	0/0	g0006	10	1	6	1	0	2	C3orf62	chr3	49263596	49282232
C3orf62_chr3_49263596_49282232	0/0	g0007	10	1	4	1	3	1	C3orf62	chr3	49263596	49282232
C3orf62_chr3_49263596_49282232	0/0	g0008	8	6	2	0	0	0	C3orf62	chr3	49263596	49282232
C3orf62_chr3_49263596_49282232	0/0	g0009	8	6	0	0	2	0	C3orf62	chr3	49263596	49282232
C3orf62_chr3_49263596_49282232	0/0	g0010	7	6	1	0	0	0	C3orf62	chr3	49263596	49282232
C3orf62_chr3_49263596_49282232	0/0	g0011	7	0	7	0	0	0	C3orf62	chr3	49263596	49282232
C3orf62_chr3_49263596_49282232	0/0	g0012	6	0	3	2	1	0	C3orf62	chr3	49263596	49282232
C3orf62_chr3_49263596_49282232	0/0	g0013	5	0	3	0	0	2	C3orf62	chr3	49263596	49282232
C3orf62_chr3_49263596_49282232	0/0	g0014	5	5	0	0	0	0	C3orf62	chr3	49263596	49282232
C3orf62_chr3_49263596_49282232	0/1	g0015	5	1	3	0	0	0	C3orf62	chr3	49263596	49282232
C3orf62_chr3_49263596_49282232	0/0	g0016	4	1	2	0	0	1	C3orf62	chr3	49263596	49282232
C3orf62_chr3_49263596_49282232	0/0	g0017	4	2	0	1	1	0	C3orf62	chr3	49263596	49282232
C3orf62_chr3_49263596_49282232	0/0	g0018	4	1	1	0	2	0	C3orf62	chr3	49263596	49282232
C3orf62_chr3_49263596_49282232	0/0	g0019	4	0	0	4	0	0	C3orf62	chr3	49263596	49282232
C3orf62_chr3_49263596_49282232	0/0	g0020	4	4	0	0	0	0	C3orf62	chr3	49263596	49282232
C3orf62_chr3_49263596_49282232	0/0	g0021	3	3	0	0	0	0	C3orf62	chr3	49263596	49282232
C3orf62_chr3_49263596_49282232	0/0	g0022	3	0	3	0	0	0	C3orf62	chr3	49263596	49282232
C3orf62_chr3_49263596_49282232	0/0	g0023	3	0	2	1	0	0	C3orf62	chr3	49263596	49282232
C3orf62_chr3_49263596_49282232	0/0	g0024	3	3	0	0	0	0	C3orf62	chr3	49263596	49282232
C3orf62_chr3_49263596_49282232	0/0	g0025	3	0	1	2	0	0	C3orf62	chr3	49263596	49282232
C3orf62_chr3_49263596_49282232	0/0	g0026	3	0	0	3	0	0	C3orf62	chr3	49263596	49282232
C3orf62_chr3_49263596_49282232	0/0	g0027	3	0	0	1	0	2	C3orf62	chr3	49263596	49282232