JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ACP3_chr3_132312407_132363841	0/0	g0271	1	0	0	0	0	1	ACP3	chr3	132312407	132363841
ACP3_chr3_132312407_132363841	0/0	g0272	1	0	0	1	0	0	ACP3	chr3	132312407	132363841
ACP3_chr3_132312407_132363841	0/0	g0273	1	0	0	1	0	0	ACP3	chr3	132312407	132363841
ACP3_chr3_132312407_132363841	0/0	g0274	1	0	0	1	0	0	ACP3	chr3	132312407	132363841
ACP3_chr3_132312407_132363841	0/0	g0275	1	0	0	1	0	0	ACP3	chr3	132312407	132363841
ACP3_chr3_132312407_132363841	0/0	g0276	1	0	1	0	0	0	ACP3	chr3	132312407	132363841
ACP3_chr3_132312407_132363841	0/0	g0277	1	0	0	0	1	0	ACP3	chr3	132312407	132363841
ACP3_chr3_132312407_132363841	0/0	g0278	1	0	1	0	0	0	ACP3	chr3	132312407	132363841
ACP3_chr3_132312407_132363841	0/0	g0279	1	0	1	0	0	0	ACP3	chr3	132312407	132363841
ACP3_chr3_132312407_132363841	0/0	g0280	1	0	0	1	0	0	ACP3	chr3	132312407	132363841
ACP3_chr3_132312407_132363841	0/0	g0281	1	0	1	0	0	0	ACP3	chr3	132312407	132363841
ACP3_chr3_132312407_132363841	0/0	g0282	1	0	0	1	0	0	ACP3	chr3	132312407	132363841
ACP3_chr3_132312407_132363841	0/0	g0283	1	0	1	0	0	0	ACP3	chr3	132312407	132363841
ACP3_chr3_132312407_132363841	0/0	g0284	1	0	1	0	0	0	ACP3	chr3	132312407	132363841
ACP3_chr3_132312407_132363841	0/0	g0285	1	0	1	0	0	0	ACP3	chr3	132312407	132363841
ACP3_chr3_132312407_132363841	0/0	g0286	1	0	0	1	0	0	ACP3	chr3	132312407	132363841
ACP3_chr3_132312407_132363841	0/0	g0287	1	0	0	0	1	0	ACP3	chr3	132312407	132363841
ACP3_chr3_132312407_132363841	0/0	g0288	1	0	1	0	0	0	ACP3	chr3	132312407	132363841
ACP3_chr3_132312407_132363841	0/0	g0289	1	0	0	1	0	0	ACP3	chr3	132312407	132363841
ACP3_chr3_132312407_132363841	0/0	g0290	1	0	1	0	0	0	ACP3	chr3	132312407	132363841
ACP3_chr3_132312407_132363841	0/0	g0291	1	0	0	1	0	0	ACP3	chr3	132312407	132363841
ACP3_chr3_132312407_132363841	0/0	g0292	1	0	0	1	0	0	ACP3	chr3	132312407	132363841
ACP3_chr3_132312407_132363841	0/0	g0293	1	0	0	1	0	0	ACP3	chr3	132312407	132363841
ACP3_chr3_132312407_132363841	0/0	g0294	1	0	0	0	0	1	ACP3	chr3	132312407	132363841
ACP3_chr3_132312407_132363841	0/0	g0295	1	0	0	1	0	0	ACP3	chr3	132312407	132363841
ACP3_chr3_132312407_132363841	0/0	g0296	1	0	0	1	0	0	ACP3	chr3	132312407	132363841
ACP3_chr3_132312407_132363841	0/0	g0297	1	1	0	0	0	0	ACP3	chr3	132312407	132363841
ACP3_chr3_132312407_132363841	0/0	g0298	1	1	0	0	0	0	ACP3	chr3	132312407	132363841
ACP3_chr3_132312407_132363841	0/0	g0299	1	1	0	0	0	0	ACP3	chr3	132312407	132363841
ACP3_chr3_132312407_132363841	0/0	g0300	1	0	0	0	1	0	ACP3	chr3	132312407	132363841
ACP3_chr3_132312407_132363841	0/0	g0301	1	0	0	1	0	0	ACP3	chr3	132312407	132363841
ACP3_chr3_132312407_132363841	0/0	g0302	1	0	0	0	0	1	ACP3	chr3	132312407	132363841
ACP3_chr3_132312407_132363841	0/0	g0303	1	0	0	0	0	1	ACP3	chr3	132312407	132363841
ACP3_chr3_132312407_132363841	0/0	g0304	1	0	0	1	0	0	ACP3	chr3	132312407	132363841
ACP3_chr3_132312407_132363841	0/0	g0305	1	0	0	1	0	0	ACP3	chr3	132312407	132363841
ACP4_chr19_50785415_50800219	1/0	g0001	103	20	38	23	9	12	ACP4	chr19	50785415	50800219
ACP4_chr19_50785415_50800219	0/1	g0002	61	3	5	43	1	8	ACP4	chr19	50785415	50800219
ACP4_chr19_50785415_50800219	0/0	g0003	38	8	7	19	1	3	ACP4	chr19	50785415	50800219
ACP4_chr19_50785415_50800219	0/0	g0004	30	7	6	11	0	6	ACP4	chr19	50785415	50800219
ACP4_chr19_50785415_50800219	0/0	g0005	20	1	5	14	0	0	ACP4	chr19	50785415	50800219
ACP4_chr19_50785415_50800219	0/0	g0006	14	12	2	0	0	0	ACP4	chr19	50785415	50800219
ACP4_chr19_50785415_50800219	0/0	g0007	10	0	0	10	0	0	ACP4	chr19	50785415	50800219
ACP4_chr19_50785415_50800219	0/0	g0008	10	0	1	9	0	0	ACP4	chr19	50785415	50800219
ACP4_chr19_50785415_50800219	0/0	g0009	6	0	1	5	0	0	ACP4	chr19	50785415	50800219
ACP4_chr19_50785415_50800219	0/0	g0010	6	2	2	2	0	0	ACP4	chr19	50785415	50800219
ACP4_chr19_50785415_50800219	0/0	g0011	6	0	2	1	0	3	ACP4	chr19	50785415	50800219
ACP4_chr19_50785415_50800219	0/0	g0012	5	4	1	0	0	0	ACP4	chr19	50785415	50800219
ACP4_chr19_50785415_50800219	0/0	g0013	5	4	1	0	0	0	ACP4	chr19	50785415	50800219
ACP4_chr19_50785415_50800219	0/0	g0014	4	0	0	4	0	0	ACP4	chr19	50785415	50800219
ACP4_chr19_50785415_50800219	0/0	g0015	4	4	0	0	0	0	ACP4	chr19	50785415	50800219