JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C4BPA_chr1_207099233_207149972	0/0	g0281	1	1	0	0	0	0	C4BPA	chr1	207099233	207149972
C4BPA_chr1_207099233_207149972	0/0	g0282	1	1	0	0	0	0	C4BPA	chr1	207099233	207149972
C4BPA_chr1_207099233_207149972	0/0	g0283	1	0	1	0	0	0	C4BPA	chr1	207099233	207149972
C4BPA_chr1_207099233_207149972	0/0	g0284	1	1	0	0	0	0	C4BPA	chr1	207099233	207149972
C4BPA_chr1_207099233_207149972	0/0	g0285	1	0	0	0	0	1	C4BPA	chr1	207099233	207149972
C4BPA_chr1_207099233_207149972	0/0	g0286	1	0	1	0	0	0	C4BPA	chr1	207099233	207149972
C4BPA_chr1_207099233_207149972	0/0	g0287	1	0	0	0	0	1	C4BPA	chr1	207099233	207149972
C4BPA_chr1_207099233_207149972	0/0	g0288	1	0	0	0	0	1	C4BPA	chr1	207099233	207149972
C4BPA_chr1_207099233_207149972	0/0	g0289	1	0	0	0	0	1	C4BPA	chr1	207099233	207149972
C4BPA_chr1_207099233_207149972	0/0	g0290	1	0	0	1	0	0	C4BPA	chr1	207099233	207149972
C4BPA_chr1_207099233_207149972	0/0	g0291	1	0	0	0	0	1	C4BPA	chr1	207099233	207149972
C4BPA_chr1_207099233_207149972	0/0	g0292	1	1	0	0	0	0	C4BPA	chr1	207099233	207149972
C4BPA_chr1_207099233_207149972	0/0	g0293	1	1	0	0	0	0	C4BPA	chr1	207099233	207149972
C4BPA_chr1_207099233_207149972	0/0	g0294	1	1	0	0	0	0	C4BPA	chr1	207099233	207149972
C4BPA_chr1_207099233_207149972	0/0	g0295	1	1	0	0	0	0	C4BPA	chr1	207099233	207149972
C4BPA_chr1_207099233_207149972	0/0	g0296	1	1	0	0	0	0	C4BPA	chr1	207099233	207149972
C4BPA_chr1_207099233_207149972	0/0	g0297	1	1	0	0	0	0	C4BPA	chr1	207099233	207149972
C4BPA_chr1_207099233_207149972	0/0	g0298	1	1	0	0	0	0	C4BPA	chr1	207099233	207149972
C4BPA_chr1_207099233_207149972	0/0	g0299	1	1	0	0	0	0	C4BPA	chr1	207099233	207149972
C4BPA_chr1_207099233_207149972	0/0	g0300	1	1	0	0	0	0	C4BPA	chr1	207099233	207149972
C4BPA_chr1_207099233_207149972	0/0	g0301	1	1	0	0	0	0	C4BPA	chr1	207099233	207149972
C4BPA_chr1_207099233_207149972	0/0	g0302	1	0	1	0	0	0	C4BPA	chr1	207099233	207149972
C4BPA_chr1_207099233_207149972	0/0	g0303	1	0	1	0	0	0	C4BPA	chr1	207099233	207149972
C4BPA_chr1_207099233_207149972	0/0	g0304	1	0	0	1	0	0	C4BPA	chr1	207099233	207149972
C4BPA_chr1_207099233_207149972	0/0	g0305	1	0	0	1	0	0	C4BPA	chr1	207099233	207149972
C4BPA_chr1_207099233_207149972	0/0	g0306	1	0	1	0	0	0	C4BPA	chr1	207099233	207149972
C4BPA_chr1_207099233_207149972	0/0	g0307	1	0	1	0	0	0	C4BPA	chr1	207099233	207149972
C4BPA_chr1_207099233_207149972	0/0	g0308	1	0	1	0	0	0	C4BPA	chr1	207099233	207149972
C4BPA_chr1_207099233_207149972	0/0	g0309	1	1	0	0	0	0	C4BPA	chr1	207099233	207149972
C4BPA_chr1_207099233_207149972	0/0	g0310	1	1	0	0	0	0	C4BPA	chr1	207099233	207149972
C4BPA_chr1_207099233_207149972	0/0	g0311	1	0	0	0	0	1	C4BPA	chr1	207099233	207149972
C4BPA_chr1_207099233_207149972	0/0	g0312	1	0	0	1	0	0	C4BPA	chr1	207099233	207149972
C4BPB_chr1_207083860_207104993	0/0	g0001	73	0	11	57	2	3	C4BPB	chr1	207083860	207104993
C4BPB_chr1_207083860_207104993	0/0	g0002	32	6	8	4	5	9	C4BPB	chr1	207083860	207104993
C4BPB_chr1_207083860_207104993	0/0	g0003	25	0	10	6	4	5	C4BPB	chr1	207083860	207104993
C4BPB_chr1_207083860_207104993	0/0	g0004	18	2	5	9	0	2	C4BPB	chr1	207083860	207104993
C4BPB_chr1_207083860_207104993	0/0	g0005	10	0	0	10	0	0	C4BPB	chr1	207083860	207104993
C4BPB_chr1_207083860_207104993	0/0	g0006	9	1	8	0	0	0	C4BPB	chr1	207083860	207104993
C4BPB_chr1_207083860_207104993	0/0	g0007	7	0	0	0	1	6	C4BPB	chr1	207083860	207104993
C4BPB_chr1_207083860_207104993	0/0	g0008	7	0	2	5	0	0	C4BPB	chr1	207083860	207104993
C4BPB_chr1_207083860_207104993	0/0	g0009	7	7	0	0	0	0	C4BPB	chr1	207083860	207104993
C4BPB_chr1_207083860_207104993	0/0	g0010	6	0	6	0	0	0	C4BPB	chr1	207083860	207104993
C4BPB_chr1_207083860_207104993	1/0	g0011	6	1	1	1	1	1	C4BPB	chr1	207083860	207104993
C4BPB_chr1_207083860_207104993	0/0	g0012	5	0	1	2	0	2	C4BPB	chr1	207083860	207104993
C4BPB_chr1_207083860_207104993	0/0	g0013	5	2	3	0	0	0	C4BPB	chr1	207083860	207104993
C4BPB_chr1_207083860_207104993	0/0	g0014	5	1	2	0	2	0	C4BPB	chr1	207083860	207104993
C4BPB_chr1_207083860_207104993	0/0	g0015	5	5	0	0	0	0	C4BPB	chr1	207083860	207104993
C4BPB_chr1_207083860_207104993	0/0	g0016	5	5	0	0	0	0	C4BPB	chr1	207083860	207104993
C4BPB_chr1_207083860_207104993	0/0	g0017	4	0	0	4	0	0	C4BPB	chr1	207083860	207104993
C4BPB_chr1_207083860_207104993	0/0	g0018	4	3	1	0	0	0	C4BPB	chr1	207083860	207104993