JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C4BPB_chr1_207083860_207104993	0/0	g0119	1	1	0	0	0	0	C4BPB	chr1	207083860	207104993
C4BPB_chr1_207083860_207104993	0/0	g0120	1	0	0	0	0	1	C4BPB	chr1	207083860	207104993
C4BPB_chr1_207083860_207104993	0/0	g0121	1	0	0	0	0	1	C4BPB	chr1	207083860	207104993
C4BPB_chr1_207083860_207104993	0/0	g0122	1	0	0	0	0	1	C4BPB	chr1	207083860	207104993
C4BPB_chr1_207083860_207104993	0/0	g0123	1	1	0	0	0	0	C4BPB	chr1	207083860	207104993
C4BPB_chr1_207083860_207104993	0/0	g0124	1	1	0	0	0	0	C4BPB	chr1	207083860	207104993
C4BPB_chr1_207083860_207104993	0/0	g0125	1	0	0	0	0	1	C4BPB	chr1	207083860	207104993
C4BPB_chr1_207083860_207104993	0/0	g0126	1	1	0	0	0	0	C4BPB	chr1	207083860	207104993
C4BPB_chr1_207083860_207104993	0/0	g0127	1	1	0	0	0	0	C4BPB	chr1	207083860	207104993
C4BPB_chr1_207083860_207104993	0/0	g0128	1	1	0	0	0	0	C4BPB	chr1	207083860	207104993
C4BPB_chr1_207083860_207104993	0/0	g0129	1	1	0	0	0	0	C4BPB	chr1	207083860	207104993
C4BPB_chr1_207083860_207104993	0/0	g0130	1	1	0	0	0	0	C4BPB	chr1	207083860	207104993
C4BPB_chr1_207083860_207104993	0/0	g0131	1	1	0	0	0	0	C4BPB	chr1	207083860	207104993
C4BPB_chr1_207083860_207104993	0/0	g0132	1	1	0	0	0	0	C4BPB	chr1	207083860	207104993
C4BPB_chr1_207083860_207104993	0/0	g0133	1	1	0	0	0	0	C4BPB	chr1	207083860	207104993
C4B_chr6_32009795_32040418	0/0	g0001	25	1	8	13	1	2	C4B	chr6	32009795	32040418
C4B_chr6_32009795_32040418	0/0	g0002	21	11	6	4	0	0	C4B	chr6	32009795	32040418
C4B_chr6_32009795_32040418	0/0	g0003	14	0	4	9	0	1	C4B	chr6	32009795	32040418
C4B_chr6_32009795_32040418	0/0	g0004	13	6	5	0	2	0	C4B	chr6	32009795	32040418
C4B_chr6_32009795_32040418	0/0	g0005	12	0	4	6	1	1	C4B	chr6	32009795	32040418
C4B_chr6_32009795_32040418	0/0	g0006	11	0	6	5	0	0	C4B	chr6	32009795	32040418
C4B_chr6_32009795_32040418	0/0	g0007	11	0	1	6	2	2	C4B	chr6	32009795	32040418
C4B_chr6_32009795_32040418	0/0	g0008	9	0	0	9	0	0	C4B	chr6	32009795	32040418
C4B_chr6_32009795_32040418	0/0	g0009	9	3	0	2	1	3	C4B	chr6	32009795	32040418
C4B_chr6_32009795_32040418	0/0	g0010	9	0	0	9	0	0	C4B	chr6	32009795	32040418
C4B_chr6_32009795_32040418	0/0	g0011	9	9	0	0	0	0	C4B	chr6	32009795	32040418
C4B_chr6_32009795_32040418	0/0	g0012	8	0	1	6	0	1	C4B	chr6	32009795	32040418
C4B_chr6_32009795_32040418	0/0	g0013	8	0	3	4	1	0	C4B	chr6	32009795	32040418
C4B_chr6_32009795_32040418	0/0	g0014	8	1	0	6	0	1	C4B	chr6	32009795	32040418
C4B_chr6_32009795_32040418	0/0	g0015	8	0	0	8	0	0	C4B	chr6	32009795	32040418
C4B_chr6_32009795_32040418	0/0	g0016	6	1	3	2	0	0	C4B	chr6	32009795	32040418
C4B_chr6_32009795_32040418	0/0	g0017	6	0	0	1	1	4	C4B	chr6	32009795	32040418
C4B_chr6_32009795_32040418	0/0	g0018	5	2	1	0	2	0	C4B	chr6	32009795	32040418
C4B_chr6_32009795_32040418	0/0	g0019	5	1	1	3	0	0	C4B	chr6	32009795	32040418
C4B_chr6_32009795_32040418	0/0	g0020	4	0	0	4	0	0	C4B	chr6	32009795	32040418
C4B_chr6_32009795_32040418	0/0	g0021	4	0	0	4	0	0	C4B	chr6	32009795	32040418
C4B_chr6_32009795_32040418	0/0	g0022	4	0	0	4	0	0	C4B	chr6	32009795	32040418
C4B_chr6_32009795_32040418	0/0	g0023	4	1	1	2	0	0	C4B	chr6	32009795	32040418
C4B_chr6_32009795_32040418	0/0	g0024	4	4	0	0	0	0	C4B	chr6	32009795	32040418
C4B_chr6_32009795_32040418	0/0	g0025	4	1	3	0	0	0	C4B	chr6	32009795	32040418
C4B_chr6_32009795_32040418	0/0	g0026	3	0	0	3	0	0	C4B	chr6	32009795	32040418
C4B_chr6_32009795_32040418	0/0	g0027	3	0	0	3	0	0	C4B	chr6	32009795	32040418
C4B_chr6_32009795_32040418	0/0	g0028	3	3	0	0	0	0	C4B	chr6	32009795	32040418
C4B_chr6_32009795_32040418	0/0	g0029	3	1	0	2	0	0	C4B	chr6	32009795	32040418
C4B_chr6_32009795_32040418	0/0	g0030	3	3	0	0	0	0	C4B	chr6	32009795	32040418
C4B_chr6_32009795_32040418	0/0	g0031	3	0	0	0	0	3	C4B	chr6	32009795	32040418
C4B_chr6_32009795_32040418	0/0	g0032	3	3	0	0	0	0	C4B	chr6	32009795	32040418
C4B_chr6_32009795_32040418	0/0	g0033	2	0	0	2	0	0	C4B	chr6	32009795	32040418
C4B_chr6_32009795_32040418	0/0	g0034	2	0	0	2	0	0	C4B	chr6	32009795	32040418
C4B_chr6_32009795_32040418	0/0	g0035	2	0	2	0	0	0	C4B	chr6	32009795	32040418