JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C4orf33_chr4_129091152_129121637	0/0	g0098	1	1	0	0	0	0	C4orf33	chr4	129091152	129121637
C4orf33_chr4_129091152_129121637	0/0	g0099	1	1	0	0	0	0	C4orf33	chr4	129091152	129121637
C4orf33_chr4_129091152_129121637	0/0	g0100	1	0	0	1	0	0	C4orf33	chr4	129091152	129121637
C4orf33_chr4_129091152_129121637	0/0	g0101	1	1	0	0	0	0	C4orf33	chr4	129091152	129121637
C4orf33_chr4_129091152_129121637	0/0	g0102	1	0	0	1	0	0	C4orf33	chr4	129091152	129121637
C4orf33_chr4_129091152_129121637	0/0	g0103	1	0	0	0	1	0	C4orf33	chr4	129091152	129121637
C4orf33_chr4_129091152_129121637	0/0	g0104	1	0	0	1	0	0	C4orf33	chr4	129091152	129121637
C4orf33_chr4_129091152_129121637	0/0	g0105	1	1	0	0	0	0	C4orf33	chr4	129091152	129121637
C4orf33_chr4_129091152_129121637	0/0	g0106	1	0	1	0	0	0	C4orf33	chr4	129091152	129121637
C4orf33_chr4_129091152_129121637	0/0	g0107	1	1	0	0	0	0	C4orf33	chr4	129091152	129121637
C4orf33_chr4_129091152_129121637	0/0	g0108	1	0	0	1	0	0	C4orf33	chr4	129091152	129121637
C4orf33_chr4_129091152_129121637	0/0	g0109	1	0	0	1	0	0	C4orf33	chr4	129091152	129121637
C4orf33_chr4_129091152_129121637	0/0	g0110	1	1	0	0	0	0	C4orf33	chr4	129091152	129121637
C4orf33_chr4_129091152_129121637	0/0	g0111	1	0	1	0	0	0	C4orf33	chr4	129091152	129121637
C4orf33_chr4_129091152_129121637	1/0	g0112	1	0	0	0	0	0	C4orf33	chr4	129091152	129121637
C4orf36_chr4_86871205_86897422	0/0	g0001	45	0	5	40	0	0	C4orf36	chr4	86871205	86897422
C4orf36_chr4_86871205_86897422	0/0	g0002	29	1	4	21	0	3	C4orf36	chr4	86871205	86897422
C4orf36_chr4_86871205_86897422	0/0	g0003	25	0	5	17	2	1	C4orf36	chr4	86871205	86897422
C4orf36_chr4_86871205_86897422	0/0	g0004	16	2	1	11	0	2	C4orf36	chr4	86871205	86897422
C4orf36_chr4_86871205_86897422	0/0	g0005	10	1	3	0	0	6	C4orf36	chr4	86871205	86897422
C4orf36_chr4_86871205_86897422	0/0	g0006	8	8	0	0	0	0	C4orf36	chr4	86871205	86897422
C4orf36_chr4_86871205_86897422	0/0	g0007	7	0	2	5	0	0	C4orf36	chr4	86871205	86897422
C4orf36_chr4_86871205_86897422	0/0	g0008	5	0	4	0	1	0	C4orf36	chr4	86871205	86897422
C4orf36_chr4_86871205_86897422	0/0	g0009	5	1	0	0	0	4	C4orf36	chr4	86871205	86897422
C4orf36_chr4_86871205_86897422	0/0	g0010	4	4	0	0	0	0	C4orf36	chr4	86871205	86897422
C4orf36_chr4_86871205_86897422	0/0	g0011	4	0	0	0	4	0	C4orf36	chr4	86871205	86897422
C4orf36_chr4_86871205_86897422	0/0	g0012	4	2	1	0	1	0	C4orf36	chr4	86871205	86897422
C4orf36_chr4_86871205_86897422	0/0	g0013	4	4	0	0	0	0	C4orf36	chr4	86871205	86897422
C4orf36_chr4_86871205_86897422	0/0	g0014	4	3	1	0	0	0	C4orf36	chr4	86871205	86897422
C4orf36_chr4_86871205_86897422	0/0	g0015	4	4	0	0	0	0	C4orf36	chr4	86871205	86897422
C4orf36_chr4_86871205_86897422	0/0	g0016	3	0	1	0	0	2	C4orf36	chr4	86871205	86897422
C4orf36_chr4_86871205_86897422	0/0	g0017	3	0	2	0	0	1	C4orf36	chr4	86871205	86897422
C4orf36_chr4_86871205_86897422	0/0	g0018	3	3	0	0	0	0	C4orf36	chr4	86871205	86897422
C4orf36_chr4_86871205_86897422	0/0	g0019	3	0	0	3	0	0	C4orf36	chr4	86871205	86897422
C4orf36_chr4_86871205_86897422	0/0	g0020	3	0	0	3	0	0	C4orf36	chr4	86871205	86897422
C4orf36_chr4_86871205_86897422	0/0	g0021	3	0	3	0	0	0	C4orf36	chr4	86871205	86897422
C4orf36_chr4_86871205_86897422	0/0	g0022	3	0	0	3	0	0	C4orf36	chr4	86871205	86897422
C4orf36_chr4_86871205_86897422	0/0	g0023	3	0	0	3	0	0	C4orf36	chr4	86871205	86897422
C4orf36_chr4_86871205_86897422	0/0	g0024	3	0	0	3	0	0	C4orf36	chr4	86871205	86897422
C4orf36_chr4_86871205_86897422	0/0	g0025	3	0	0	0	3	0	C4orf36	chr4	86871205	86897422
C4orf36_chr4_86871205_86897422	1/0	g0026	3	2	0	0	0	0	C4orf36	chr4	86871205	86897422
C4orf36_chr4_86871205_86897422	0/0	g0027	3	3	0	0	0	0	C4orf36	chr4	86871205	86897422
C4orf36_chr4_86871205_86897422	0/0	g0028	3	3	0	0	0	0	C4orf36	chr4	86871205	86897422
C4orf36_chr4_86871205_86897422	0/0	g0029	2	2	0	0	0	0	C4orf36	chr4	86871205	86897422
C4orf36_chr4_86871205_86897422	0/0	g0030	2	2	0	0	0	0	C4orf36	chr4	86871205	86897422
C4orf36_chr4_86871205_86897422	0/0	g0031	2	2	0	0	0	0	C4orf36	chr4	86871205	86897422
C4orf36_chr4_86871205_86897422	0/0	g0032	2	0	2	0	0	0	C4orf36	chr4	86871205	86897422
C4orf36_chr4_86871205_86897422	0/0	g0033	2	0	0	2	0	0	C4orf36	chr4	86871205	86897422
C4orf36_chr4_86871205_86897422	0/1	g0034	2	0	1	0	0	0	C4orf36	chr4	86871205	86897422
C4orf36_chr4_86871205_86897422	0/0	g0035	2	0	2	0	0	0	C4orf36	chr4	86871205	86897422