JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C4orf47_chr4_185421254_185454826	0/0	g0297	1	0	1	0	0	0	C4orf47	chr4	185421254	185454826
C4orf47_chr4_185421254_185454826	0/0	g0298	1	1	0	0	0	0	C4orf47	chr4	185421254	185454826
C4orf47_chr4_185421254_185454826	0/0	g0299	1	0	0	0	0	1	C4orf47	chr4	185421254	185454826
C4orf47_chr4_185421254_185454826	0/0	g0300	1	0	0	1	0	0	C4orf47	chr4	185421254	185454826
C4orf47_chr4_185421254_185454826	0/0	g0301	1	0	0	1	0	0	C4orf47	chr4	185421254	185454826
C4orf47_chr4_185421254_185454826	0/0	g0302	1	0	0	1	0	0	C4orf47	chr4	185421254	185454826
C4orf47_chr4_185421254_185454826	0/0	g0303	1	0	1	0	0	0	C4orf47	chr4	185421254	185454826
C4orf47_chr4_185421254_185454826	0/0	g0304	1	1	0	0	0	0	C4orf47	chr4	185421254	185454826
C4orf47_chr4_185421254_185454826	0/0	g0305	1	1	0	0	0	0	C4orf47	chr4	185421254	185454826
C4orf47_chr4_185421254_185454826	0/0	g0306	1	1	0	0	0	0	C4orf47	chr4	185421254	185454826
C4orf47_chr4_185421254_185454826	0/0	g0307	1	1	0	0	0	0	C4orf47	chr4	185421254	185454826
C4orf47_chr4_185421254_185454826	0/0	g0308	1	1	0	0	0	0	C4orf47	chr4	185421254	185454826
C4orf47_chr4_185421254_185454826	0/0	g0309	1	1	0	0	0	0	C4orf47	chr4	185421254	185454826
C4orf47_chr4_185421254_185454826	0/0	g0310	1	0	0	1	0	0	C4orf47	chr4	185421254	185454826
C4orf47_chr4_185421254_185454826	0/0	g0311	1	1	0	0	0	0	C4orf47	chr4	185421254	185454826
C4orf47_chr4_185421254_185454826	0/0	g0312	1	1	0	0	0	0	C4orf47	chr4	185421254	185454826
C4orf47_chr4_185421254_185454826	0/0	g0313	1	1	0	0	0	0	C4orf47	chr4	185421254	185454826
C4orf47_chr4_185421254_185454826	0/0	g0314	1	1	0	0	0	0	C4orf47	chr4	185421254	185454826
C4orf47_chr4_185421254_185454826	0/0	g0315	1	1	0	0	0	0	C4orf47	chr4	185421254	185454826
C4orf47_chr4_185421254_185454826	0/0	g0316	1	0	0	0	0	1	C4orf47	chr4	185421254	185454826
C4orf47_chr4_185421254_185454826	0/0	g0317	1	0	0	1	0	0	C4orf47	chr4	185421254	185454826
C4orf47_chr4_185421254_185454826	0/0	g0318	1	0	0	1	0	0	C4orf47	chr4	185421254	185454826
C4orf48_chr4_2036995_2048964	0/0	g0001	199	18	47	102	7	25	C4orf48	chr4	2036995	2048964
C4orf48_chr4_2036995_2048964	0/1	g0002	112	33	25	44	4	5	C4orf48	chr4	2036995	2048964
C4orf48_chr4_2036995_2048964	0/0	g0003	22	1	0	15	1	5	C4orf48	chr4	2036995	2048964
C4orf48_chr4_2036995_2048964	0/0	g0004	20	19	0	0	0	1	C4orf48	chr4	2036995	2048964
C4orf48_chr4_2036995_2048964	1/0	g0005	15	12	1	1	0	0	C4orf48	chr4	2036995	2048964
C4orf48_chr4_2036995_2048964	0/0	g0006	6	0	0	6	0	0	C4orf48	chr4	2036995	2048964
C4orf48_chr4_2036995_2048964	0/0	g0007	5	4	1	0	0	0	C4orf48	chr4	2036995	2048964
C4orf48_chr4_2036995_2048964	0/0	g0008	3	1	1	1	0	0	C4orf48	chr4	2036995	2048964
C4orf48_chr4_2036995_2048964	0/0	g0009	2	2	0	0	0	0	C4orf48	chr4	2036995	2048964
C4orf48_chr4_2036995_2048964	0/0	g0010	1	0	0	1	0	0	C4orf48	chr4	2036995	2048964
C4orf48_chr4_2036995_2048964	0/0	g0011	1	0	0	1	0	0	C4orf48	chr4	2036995	2048964
C4orf48_chr4_2036995_2048964	0/0	g0012	1	0	0	1	0	0	C4orf48	chr4	2036995	2048964
C4orf48_chr4_2036995_2048964	0/0	g0013	1	1	0	0	0	0	C4orf48	chr4	2036995	2048964
C4orf48_chr4_2036995_2048964	0/0	g0014	1	1	0	0	0	0	C4orf48	chr4	2036995	2048964
C4orf48_chr4_2036995_2048964	0/0	g0015	1	0	0	1	0	0	C4orf48	chr4	2036995	2048964
C4orf48_chr4_2036995_2048964	0/0	g0016	1	0	1	0	0	0	C4orf48	chr4	2036995	2048964
C4orf48_chr4_2036995_2048964	0/0	g0017	1	0	0	1	0	0	C4orf48	chr4	2036995	2048964
C4orf50_chr4_5954375_6023431	0/0	g0001	2	2	0	0	0	0	C4orf50	chr4	5954375	6023431
C4orf50_chr4_5954375_6023431	0/0	g0002	2	0	2	0	0	0	C4orf50	chr4	5954375	6023431
C4orf50_chr4_5954375_6023431	0/0	g0003	2	0	0	2	0	0	C4orf50	chr4	5954375	6023431
C4orf50_chr4_5954375_6023431	0/0	g0004	2	0	2	0	0	0	C4orf50	chr4	5954375	6023431
C4orf50_chr4_5954375_6023431	0/0	g0005	2	0	2	0	0	0	C4orf50	chr4	5954375	6023431
C4orf50_chr4_5954375_6023431	0/0	g0006	2	0	0	2	0	0	C4orf50	chr4	5954375	6023431
C4orf50_chr4_5954375_6023431	0/0	g0007	2	0	2	0	0	0	C4orf50	chr4	5954375	6023431
C4orf50_chr4_5954375_6023431	0/0	g0008	2	1	1	0	0	0	C4orf50	chr4	5954375	6023431
C4orf50_chr4_5954375_6023431	0/0	g0009	1	1	0	0	0	0	C4orf50	chr4	5954375	6023431
C4orf50_chr4_5954375_6023431	0/0	g0010	1	1	0	0	0	0	C4orf50	chr4	5954375	6023431
C4orf50_chr4_5954375_6023431	0/0	g0011	1	1	0	0	0	0	C4orf50	chr4	5954375	6023431