JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C4orf50_chr4_5954375_6023431	0/0	g0312	1	0	0	0	0	1	C4orf50	chr4	5954375	6023431
C4orf50_chr4_5954375_6023431	0/0	g0313	1	0	0	0	0	1	C4orf50	chr4	5954375	6023431
C4orf50_chr4_5954375_6023431	0/0	g0314	1	1	0	0	0	0	C4orf50	chr4	5954375	6023431
C4orf50_chr4_5954375_6023431	0/0	g0315	1	0	1	0	0	0	C4orf50	chr4	5954375	6023431
C4orf50_chr4_5954375_6023431	0/0	g0316	1	0	0	0	0	1	C4orf50	chr4	5954375	6023431
C4orf50_chr4_5954375_6023431	0/0	g0317	1	0	1	0	0	0	C4orf50	chr4	5954375	6023431
C4orf50_chr4_5954375_6023431	0/0	g0318	1	0	0	0	1	0	C4orf50	chr4	5954375	6023431
C4orf50_chr4_5954375_6023431	0/0	g0319	1	0	1	0	0	0	C4orf50	chr4	5954375	6023431
C4orf50_chr4_5954375_6023431	0/0	g0320	1	0	0	0	0	1	C4orf50	chr4	5954375	6023431
C4orf50_chr4_5954375_6023431	0/0	g0321	1	0	0	0	1	0	C4orf50	chr4	5954375	6023431
C4orf50_chr4_5954375_6023431	0/0	g0322	1	0	0	0	0	1	C4orf50	chr4	5954375	6023431
C4orf50_chr4_5954375_6023431	0/0	g0323	1	0	0	0	0	1	C4orf50	chr4	5954375	6023431
C4orf50_chr4_5954375_6023431	0/0	g0324	1	0	0	0	0	1	C4orf50	chr4	5954375	6023431
C4orf50_chr4_5954375_6023431	0/0	g0325	1	1	0	0	0	0	C4orf50	chr4	5954375	6023431
C4orf50_chr4_5954375_6023431	0/0	g0326	1	1	0	0	0	0	C4orf50	chr4	5954375	6023431
C4orf50_chr4_5954375_6023431	0/0	g0327	1	1	0	0	0	0	C4orf50	chr4	5954375	6023431
C4orf50_chr4_5954375_6023431	0/0	g0328	1	1	0	0	0	0	C4orf50	chr4	5954375	6023431
C4orf50_chr4_5954375_6023431	0/0	g0329	1	1	0	0	0	0	C4orf50	chr4	5954375	6023431
C4orf50_chr4_5954375_6023431	0/0	g0330	1	0	1	0	0	0	C4orf50	chr4	5954375	6023431
C4orf50_chr4_5954375_6023431	0/0	g0331	1	1	0	0	0	0	C4orf50	chr4	5954375	6023431
C4orf50_chr4_5954375_6023431	0/0	g0332	1	1	0	0	0	0	C4orf50	chr4	5954375	6023431
C4orf50_chr4_5954375_6023431	0/0	g0333	1	0	1	0	0	0	C4orf50	chr4	5954375	6023431
C4orf50_chr4_5954375_6023431	0/0	g0334	1	0	0	0	1	0	C4orf50	chr4	5954375	6023431
C4orf50_chr4_5954375_6023431	0/0	g0335	1	0	1	0	0	0	C4orf50	chr4	5954375	6023431
C4orf50_chr4_5954375_6023431	0/0	g0336	1	0	0	1	0	0	C4orf50	chr4	5954375	6023431
C4orf50_chr4_5954375_6023431	0/0	g0337	1	0	0	1	0	0	C4orf50	chr4	5954375	6023431
C4orf50_chr4_5954375_6023431	0/0	g0338	1	0	0	1	0	0	C4orf50	chr4	5954375	6023431
C4orf54_chr4_99631529_99662828	0/0	g0001	28	0	0	28	0	0	C4orf54	chr4	99631529	99662828
C4orf54_chr4_99631529_99662828	0/0	g0002	12	0	0	12	0	0	C4orf54	chr4	99631529	99662828
C4orf54_chr4_99631529_99662828	0/0	g0003	12	0	0	12	0	0	C4orf54	chr4	99631529	99662828
C4orf54_chr4_99631529_99662828	0/0	g0004	8	0	0	8	0	0	C4orf54	chr4	99631529	99662828
C4orf54_chr4_99631529_99662828	0/0	g0005	7	0	1	6	0	0	C4orf54	chr4	99631529	99662828
C4orf54_chr4_99631529_99662828	0/0	g0006	6	0	0	6	0	0	C4orf54	chr4	99631529	99662828
C4orf54_chr4_99631529_99662828	0/0	g0007	5	1	4	0	0	0	C4orf54	chr4	99631529	99662828
C4orf54_chr4_99631529_99662828	0/0	g0008	5	0	2	2	0	1	C4orf54	chr4	99631529	99662828
C4orf54_chr4_99631529_99662828	0/0	g0009	5	0	2	3	0	0	C4orf54	chr4	99631529	99662828
C4orf54_chr4_99631529_99662828	0/0	g0010	4	0	0	4	0	0	C4orf54	chr4	99631529	99662828
C4orf54_chr4_99631529_99662828	0/0	g0011	4	0	0	4	0	0	C4orf54	chr4	99631529	99662828
C4orf54_chr4_99631529_99662828	0/0	g0012	4	0	0	4	0	0	C4orf54	chr4	99631529	99662828
C4orf54_chr4_99631529_99662828	0/0	g0013	4	1	0	3	0	0	C4orf54	chr4	99631529	99662828
C4orf54_chr4_99631529_99662828	0/0	g0014	4	0	0	3	0	1	C4orf54	chr4	99631529	99662828
C4orf54_chr4_99631529_99662828	0/0	g0015	4	0	0	4	0	0	C4orf54	chr4	99631529	99662828
C4orf54_chr4_99631529_99662828	0/0	g0016	4	3	1	0	0	0	C4orf54	chr4	99631529	99662828
C4orf54_chr4_99631529_99662828	0/0	g0017	4	4	0	0	0	0	C4orf54	chr4	99631529	99662828
C4orf54_chr4_99631529_99662828	0/0	g0018	3	0	0	0	0	3	C4orf54	chr4	99631529	99662828
C4orf54_chr4_99631529_99662828	0/0	g0019	3	1	0	0	0	2	C4orf54	chr4	99631529	99662828
C4orf54_chr4_99631529_99662828	0/0	g0020	3	3	0	0	0	0	C4orf54	chr4	99631529	99662828
C4orf54_chr4_99631529_99662828	0/0	g0021	3	0	0	3	0	0	C4orf54	chr4	99631529	99662828
C4orf54_chr4_99631529_99662828	0/0	g0022	3	1	0	0	2	0	C4orf54	chr4	99631529	99662828
C4orf54_chr4_99631529_99662828	0/0	g0023	3	3	0	0	0	0	C4orf54	chr4	99631529	99662828