JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C5orf47_chr5_173984170_174011140	0/0	g0128	1	0	1	0	0	0	C5orf47	chr5	173984170	174011140
C5orf47_chr5_173984170_174011140	0/0	g0129	1	1	0	0	0	0	C5orf47	chr5	173984170	174011140
C5orf47_chr5_173984170_174011140	0/0	g0130	1	0	1	0	0	0	C5orf47	chr5	173984170	174011140
C5orf47_chr5_173984170_174011140	0/0	g0131	1	1	0	0	0	0	C5orf47	chr5	173984170	174011140
C5orf47_chr5_173984170_174011140	0/0	g0132	1	1	0	0	0	0	C5orf47	chr5	173984170	174011140
C5orf47_chr5_173984170_174011140	0/0	g0133	1	0	0	1	0	0	C5orf47	chr5	173984170	174011140
C5orf47_chr5_173984170_174011140	0/0	g0134	1	0	0	1	0	0	C5orf47	chr5	173984170	174011140
C5orf47_chr5_173984170_174011140	0/0	g0135	1	1	0	0	0	0	C5orf47	chr5	173984170	174011140
C5orf47_chr5_173984170_174011140	0/0	g0136	1	0	0	0	1	0	C5orf47	chr5	173984170	174011140
C5orf47_chr5_173984170_174011140	0/0	g0137	1	1	0	0	0	0	C5orf47	chr5	173984170	174011140
C5orf47_chr5_173984170_174011140	0/0	g0138	1	1	0	0	0	0	C5orf47	chr5	173984170	174011140
C5orf47_chr5_173984170_174011140	0/0	g0139	1	0	0	0	0	1	C5orf47	chr5	173984170	174011140
C5orf47_chr5_173984170_174011140	0/0	g0140	1	0	1	0	0	0	C5orf47	chr5	173984170	174011140
C5orf47_chr5_173984170_174011140	0/0	g0141	1	0	0	0	1	0	C5orf47	chr5	173984170	174011140
C5orf47_chr5_173984170_174011140	0/0	g0142	1	0	0	0	1	0	C5orf47	chr5	173984170	174011140
C5orf47_chr5_173984170_174011140	0/0	g0143	1	0	1	0	0	0	C5orf47	chr5	173984170	174011140
C5orf47_chr5_173984170_174011140	0/0	g0144	1	1	0	0	0	0	C5orf47	chr5	173984170	174011140
C5orf47_chr5_173984170_174011140	0/0	g0145	1	0	0	0	0	1	C5orf47	chr5	173984170	174011140
C5orf47_chr5_173984170_174011140	0/0	g0146	1	0	0	1	0	0	C5orf47	chr5	173984170	174011140
C5orf47_chr5_173984170_174011140	0/0	g0147	1	1	0	0	0	0	C5orf47	chr5	173984170	174011140
C5orf52_chr5_157666533_157685158	0/0	g0001	99	5	16	62	3	13	C5orf52	chr5	157666533	157685158
C5orf52_chr5_157666533_157685158	0/0	g0002	48	16	11	17	3	1	C5orf52	chr5	157666533	157685158
C5orf52_chr5_157666533_157685158	0/0	g0003	36	3	7	21	0	5	C5orf52	chr5	157666533	157685158
C5orf52_chr5_157666533_157685158	0/0	g0004	32	0	5	25	0	2	C5orf52	chr5	157666533	157685158
C5orf52_chr5_157666533_157685158	0/0	g0005	26	0	2	19	3	2	C5orf52	chr5	157666533	157685158
C5orf52_chr5_157666533_157685158	1/0	g0006	18	3	9	1	2	2	C5orf52	chr5	157666533	157685158
C5orf52_chr5_157666533_157685158	0/0	g0007	11	8	3	0	0	0	C5orf52	chr5	157666533	157685158
C5orf52_chr5_157666533_157685158	0/0	g0008	9	9	0	0	0	0	C5orf52	chr5	157666533	157685158
C5orf52_chr5_157666533_157685158	0/0	g0009	8	1	6	0	0	1	C5orf52	chr5	157666533	157685158
C5orf52_chr5_157666533_157685158	0/0	g0010	6	3	3	0	0	0	C5orf52	chr5	157666533	157685158
C5orf52_chr5_157666533_157685158	0/0	g0011	6	0	0	0	3	3	C5orf52	chr5	157666533	157685158
C5orf52_chr5_157666533_157685158	0/0	g0012	5	1	1	0	0	3	C5orf52	chr5	157666533	157685158
C5orf52_chr5_157666533_157685158	0/0	g0013	5	4	1	0	0	0	C5orf52	chr5	157666533	157685158
C5orf52_chr5_157666533_157685158	0/0	g0014	5	2	0	0	2	1	C5orf52	chr5	157666533	157685158
C5orf52_chr5_157666533_157685158	0/0	g0015	4	4	0	0	0	0	C5orf52	chr5	157666533	157685158
C5orf52_chr5_157666533_157685158	0/0	g0016	4	3	1	0	0	0	C5orf52	chr5	157666533	157685158
C5orf52_chr5_157666533_157685158	0/0	g0017	4	0	4	0	0	0	C5orf52	chr5	157666533	157685158
C5orf52_chr5_157666533_157685158	0/0	g0018	3	3	0	0	0	0	C5orf52	chr5	157666533	157685158
C5orf52_chr5_157666533_157685158	0/0	g0019	3	2	1	0	0	0	C5orf52	chr5	157666533	157685158
C5orf52_chr5_157666533_157685158	0/0	g0020	3	1	1	1	0	0	C5orf52	chr5	157666533	157685158
C5orf52_chr5_157666533_157685158	0/0	g0021	3	0	1	2	0	0	C5orf52	chr5	157666533	157685158
C5orf52_chr5_157666533_157685158	0/0	g0022	3	0	0	3	0	0	C5orf52	chr5	157666533	157685158
C5orf52_chr5_157666533_157685158	0/0	g0023	3	0	0	0	0	3	C5orf52	chr5	157666533	157685158
C5orf52_chr5_157666533_157685158	0/0	g0024	2	0	0	2	0	0	C5orf52	chr5	157666533	157685158
C5orf52_chr5_157666533_157685158	0/0	g0025	2	0	0	2	0	0	C5orf52	chr5	157666533	157685158
C5orf52_chr5_157666533_157685158	0/0	g0026	2	1	0	1	0	0	C5orf52	chr5	157666533	157685158
C5orf52_chr5_157666533_157685158	0/0	g0027	2	2	0	0	0	0	C5orf52	chr5	157666533	157685158
C5orf52_chr5_157666533_157685158	0/0	g0028	2	2	0	0	0	0	C5orf52	chr5	157666533	157685158
C5orf52_chr5_157666533_157685158	0/0	g0029	2	2	0	0	0	0	C5orf52	chr5	157666533	157685158
C5orf52_chr5_157666533_157685158	0/0	g0030	2	0	1	1	0	0	C5orf52	chr5	157666533	157685158