JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C5orf58_chr5_170227985_170251231	0/0	g0101	1	1	0	0	0	0	C5orf58	chr5	170227985	170251231
C5orf58_chr5_170227985_170251231	0/0	g0102	1	1	0	0	0	0	C5orf58	chr5	170227985	170251231
C5orf58_chr5_170227985_170251231	0/0	g0103	1	1	0	0	0	0	C5orf58	chr5	170227985	170251231
C5orf58_chr5_170227985_170251231	0/0	g0104	1	0	0	1	0	0	C5orf58	chr5	170227985	170251231
C5orf58_chr5_170227985_170251231	0/0	g0105	1	1	0	0	0	0	C5orf58	chr5	170227985	170251231
C5orf58_chr5_170227985_170251231	0/0	g0106	1	1	0	0	0	0	C5orf58	chr5	170227985	170251231
C5orf58_chr5_170227985_170251231	0/0	g0107	1	1	0	0	0	0	C5orf58	chr5	170227985	170251231
C5orf58_chr5_170227985_170251231	0/0	g0108	1	1	0	0	0	0	C5orf58	chr5	170227985	170251231
C5orf58_chr5_170227985_170251231	0/0	g0109	1	1	0	0	0	0	C5orf58	chr5	170227985	170251231
C5orf58_chr5_170227985_170251231	0/0	g0110	1	1	0	0	0	0	C5orf58	chr5	170227985	170251231
C5orf58_chr5_170227985_170251231	0/0	g0111	1	1	0	0	0	0	C5orf58	chr5	170227985	170251231
C5orf58_chr5_170227985_170251231	0/0	g0112	1	1	0	0	0	0	C5orf58	chr5	170227985	170251231
C5orf58_chr5_170227985_170251231	0/0	g0113	1	1	0	0	0	0	C5orf58	chr5	170227985	170251231
C5orf58_chr5_170227985_170251231	0/0	g0114	1	0	0	1	0	0	C5orf58	chr5	170227985	170251231
C5orf58_chr5_170227985_170251231	0/0	g0115	1	0	0	1	0	0	C5orf58	chr5	170227985	170251231
C5orf58_chr5_170227985_170251231	0/0	g0116	1	0	0	1	0	0	C5orf58	chr5	170227985	170251231
C5orf58_chr5_170227985_170251231	0/0	g0117	1	0	0	1	0	0	C5orf58	chr5	170227985	170251231
C5orf58_chr5_170227985_170251231	0/0	g0118	1	1	0	0	0	0	C5orf58	chr5	170227985	170251231
C5orf58_chr5_170227985_170251231	0/0	g0119	1	1	0	0	0	0	C5orf58	chr5	170227985	170251231
C5orf58_chr5_170227985_170251231	0/0	g0120	1	0	1	0	0	0	C5orf58	chr5	170227985	170251231
C5orf58_chr5_170227985_170251231	0/0	g0121	1	1	0	0	0	0	C5orf58	chr5	170227985	170251231
C5orf58_chr5_170227985_170251231	0/0	g0122	1	1	0	0	0	0	C5orf58	chr5	170227985	170251231
C5orf58_chr5_170227985_170251231	0/0	g0123	1	1	0	0	0	0	C5orf58	chr5	170227985	170251231
C5orf58_chr5_170227985_170251231	0/0	g0124	1	1	0	0	0	0	C5orf58	chr5	170227985	170251231
C5orf58_chr5_170227985_170251231	0/0	g0125	1	1	0	0	0	0	C5orf58	chr5	170227985	170251231
C5orf58_chr5_170227985_170251231	0/0	g0126	1	0	0	0	0	1	C5orf58	chr5	170227985	170251231
C5orf63_chr5_127046304_127078502	0/0	g0001	62	9	7	33	0	13	C5orf63	chr5	127046304	127078502
C5orf63_chr5_127046304_127078502	0/0	g0002	49	13	2	25	0	9	C5orf63	chr5	127046304	127078502
C5orf63_chr5_127046304_127078502	0/1	g0003	36	1	15	14	3	2	C5orf63	chr5	127046304	127078502
C5orf63_chr5_127046304_127078502	0/0	g0004	22	0	5	17	0	0	C5orf63	chr5	127046304	127078502
C5orf63_chr5_127046304_127078502	0/0	g0005	19	1	0	14	1	3	C5orf63	chr5	127046304	127078502
C5orf63_chr5_127046304_127078502	0/0	g0006	7	7	0	0	0	0	C5orf63	chr5	127046304	127078502
C5orf63_chr5_127046304_127078502	0/0	g0007	6	6	0	0	0	0	C5orf63	chr5	127046304	127078502
C5orf63_chr5_127046304_127078502	0/0	g0008	6	0	0	6	0	0	C5orf63	chr5	127046304	127078502
C5orf63_chr5_127046304_127078502	0/0	g0009	5	1	1	2	0	1	C5orf63	chr5	127046304	127078502
C5orf63_chr5_127046304_127078502	0/0	g0010	5	5	0	0	0	0	C5orf63	chr5	127046304	127078502
C5orf63_chr5_127046304_127078502	0/0	g0011	4	0	0	4	0	0	C5orf63	chr5	127046304	127078502
C5orf63_chr5_127046304_127078502	1/0	g0012	4	0	2	0	1	0	C5orf63	chr5	127046304	127078502
C5orf63_chr5_127046304_127078502	0/0	g0013	3	0	0	3	0	0	C5orf63	chr5	127046304	127078502
C5orf63_chr5_127046304_127078502	0/0	g0014	3	3	0	0	0	0	C5orf63	chr5	127046304	127078502
C5orf63_chr5_127046304_127078502	0/0	g0015	3	3	0	0	0	0	C5orf63	chr5	127046304	127078502
C5orf63_chr5_127046304_127078502	0/0	g0016	3	0	0	3	0	0	C5orf63	chr5	127046304	127078502
C5orf63_chr5_127046304_127078502	0/0	g0017	3	0	0	3	0	0	C5orf63	chr5	127046304	127078502
C5orf63_chr5_127046304_127078502	0/0	g0018	2	2	0	0	0	0	C5orf63	chr5	127046304	127078502
C5orf63_chr5_127046304_127078502	0/0	g0019	2	0	0	0	0	2	C5orf63	chr5	127046304	127078502
C5orf63_chr5_127046304_127078502	0/0	g0020	2	0	0	0	0	2	C5orf63	chr5	127046304	127078502
C5orf63_chr5_127046304_127078502	0/0	g0021	2	0	0	0	1	1	C5orf63	chr5	127046304	127078502
C5orf63_chr5_127046304_127078502	0/0	g0022	2	0	0	2	0	0	C5orf63	chr5	127046304	127078502
C5orf63_chr5_127046304_127078502	0/0	g0023	2	0	0	2	0	0	C5orf63	chr5	127046304	127078502
C5orf63_chr5_127046304_127078502	0/0	g0024	2	1	1	0	0	0	C5orf63	chr5	127046304	127078502