JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C6orf136_chr6_30642133_30658207	0/0	g0092	1	0	0	1	0	0	C6orf136	chr6	30642133	30658207
C6orf136_chr6_30642133_30658207	0/0	g0093	1	0	0	1	0	0	C6orf136	chr6	30642133	30658207
C6orf136_chr6_30642133_30658207	0/0	g0094	1	0	0	1	0	0	C6orf136	chr6	30642133	30658207
C6orf136_chr6_30642133_30658207	0/0	g0095	1	0	1	0	0	0	C6orf136	chr6	30642133	30658207
C6orf136_chr6_30642133_30658207	0/0	g0096	1	0	1	0	0	0	C6orf136	chr6	30642133	30658207
C6orf136_chr6_30642133_30658207	0/0	g0097	1	0	0	1	0	0	C6orf136	chr6	30642133	30658207
C6orf136_chr6_30642133_30658207	0/0	g0098	1	0	0	1	0	0	C6orf136	chr6	30642133	30658207
C6orf136_chr6_30642133_30658207	0/0	g0099	1	1	0	0	0	0	C6orf136	chr6	30642133	30658207
C6orf136_chr6_30642133_30658207	0/0	g0100	1	1	0	0	0	0	C6orf136	chr6	30642133	30658207
C6orf141_chr6_49545668_49557095	1/1	g0000	414	90	66	192	18	46	C6orf141	chr6	49545668	49557095
C6orf15_chr6_31106223_31117575	0/1	g0001	207	37	31	104	11	23	C6orf15	chr6	31106223	31117575
C6orf15_chr6_31106223_31117575	0/0	g0002	31	2	3	23	1	2	C6orf15	chr6	31106223	31117575
C6orf15_chr6_31106223_31117575	0/0	g0003	29	0	0	29	0	0	C6orf15	chr6	31106223	31117575
C6orf15_chr6_31106223_31117575	0/0	g0004	27	0	8	15	1	3	C6orf15	chr6	31106223	31117575
C6orf15_chr6_31106223_31117575	0/0	g0005	26	0	0	21	0	5	C6orf15	chr6	31106223	31117575
C6orf15_chr6_31106223_31117575	0/0	g0006	26	15	6	0	1	4	C6orf15	chr6	31106223	31117575
C6orf15_chr6_31106223_31117575	0/0	g0007	20	6	7	6	0	1	C6orf15	chr6	31106223	31117575
C6orf15_chr6_31106223_31117575	0/0	g0008	18	4	4	4	1	5	C6orf15	chr6	31106223	31117575
C6orf15_chr6_31106223_31117575	0/0	g0009	13	10	2	0	0	1	C6orf15	chr6	31106223	31117575
C6orf15_chr6_31106223_31117575	0/0	g0010	8	8	0	0	0	0	C6orf15	chr6	31106223	31117575
C6orf15_chr6_31106223_31117575	0/0	g0011	7	1	4	0	2	0	C6orf15	chr6	31106223	31117575
C6orf15_chr6_31106223_31117575	0/0	g0012	7	0	5	0	1	1	C6orf15	chr6	31106223	31117575
C6orf15_chr6_31106223_31117575	0/0	g0013	5	1	3	0	0	1	C6orf15	chr6	31106223	31117575
C6orf15_chr6_31106223_31117575	0/0	g0014	2	2	0	0	0	0	C6orf15	chr6	31106223	31117575
C6orf15_chr6_31106223_31117575	0/0	g0015	2	2	0	0	0	0	C6orf15	chr6	31106223	31117575
C6orf15_chr6_31106223_31117575	0/0	g0016	2	2	0	0	0	0	C6orf15	chr6	31106223	31117575
C6orf15_chr6_31106223_31117575	0/0	g0017	2	0	0	0	0	2	C6orf15	chr6	31106223	31117575
C6orf15_chr6_31106223_31117575	0/0	g0018	1	0	0	1	0	0	C6orf15	chr6	31106223	31117575
C6orf15_chr6_31106223_31117575	0/0	g0019	1	1	0	0	0	0	C6orf15	chr6	31106223	31117575
C6orf15_chr6_31106223_31117575	0/0	g0020	1	0	1	0	0	0	C6orf15	chr6	31106223	31117575
C6orf15_chr6_31106223_31117575	0/0	g0021	1	1	0	0	0	0	C6orf15	chr6	31106223	31117575
C6orf15_chr6_31106223_31117575	0/0	g0022	1	0	0	1	0	0	C6orf15	chr6	31106223	31117575
C6orf163_chr6_87339813_87370463	0/0	g0001	59	5	12	33	5	4	C6orf163	chr6	87339813	87370463
C6orf163_chr6_87339813_87370463	0/0	g0002	34	0	4	21	0	9	C6orf163	chr6	87339813	87370463
C6orf163_chr6_87339813_87370463	0/0	g0003	34	2	10	20	1	1	C6orf163	chr6	87339813	87370463
C6orf163_chr6_87339813_87370463	0/0	g0004	21	1	8	7	1	4	C6orf163	chr6	87339813	87370463
C6orf163_chr6_87339813_87370463	0/0	g0005	16	0	0	16	0	0	C6orf163	chr6	87339813	87370463
C6orf163_chr6_87339813_87370463	0/0	g0006	11	2	2	6	0	1	C6orf163	chr6	87339813	87370463
C6orf163_chr6_87339813_87370463	0/0	g0007	9	0	5	4	0	0	C6orf163	chr6	87339813	87370463
C6orf163_chr6_87339813_87370463	0/0	g0008	9	0	0	9	0	0	C6orf163	chr6	87339813	87370463
C6orf163_chr6_87339813_87370463	1/0	g0009	8	0	4	1	0	2	C6orf163	chr6	87339813	87370463
C6orf163_chr6_87339813_87370463	0/0	g0010	7	0	0	7	0	0	C6orf163	chr6	87339813	87370463
C6orf163_chr6_87339813_87370463	0/0	g0011	7	7	0	0	0	0	C6orf163	chr6	87339813	87370463
C6orf163_chr6_87339813_87370463	0/0	g0012	6	0	0	6	0	0	C6orf163	chr6	87339813	87370463
C6orf163_chr6_87339813_87370463	0/0	g0013	5	1	1	3	0	0	C6orf163	chr6	87339813	87370463
C6orf163_chr6_87339813_87370463	0/0	g0014	5	0	3	0	1	1	C6orf163	chr6	87339813	87370463
C6orf163_chr6_87339813_87370463	0/0	g0015	4	0	1	0	2	1	C6orf163	chr6	87339813	87370463
C6orf163_chr6_87339813_87370463	0/0	g0016	4	4	0	0	0	0	C6orf163	chr6	87339813	87370463
C6orf163_chr6_87339813_87370463	0/0	g0017	4	4	0	0	0	0	C6orf163	chr6	87339813	87370463
C6orf163_chr6_87339813_87370463	0/0	g0018	3	3	0	0	0	0	C6orf163	chr6	87339813	87370463