JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C7orf25_chr7_42904273_42917070	0/0	g0004	16	6	7	1	2	0	C7orf25	chr7	42904273	42917070
C7orf25_chr7_42904273_42917070	0/0	g0005	10	9	1	0	0	0	C7orf25	chr7	42904273	42917070
C7orf25_chr7_42904273_42917070	0/0	g0006	6	4	2	0	0	0	C7orf25	chr7	42904273	42917070
C7orf25_chr7_42904273_42917070	0/0	g0007	4	4	0	0	0	0	C7orf25	chr7	42904273	42917070
C7orf25_chr7_42904273_42917070	0/0	g0008	3	3	0	0	0	0	C7orf25	chr7	42904273	42917070
C7orf25_chr7_42904273_42917070	0/0	g0009	3	0	0	0	0	3	C7orf25	chr7	42904273	42917070
C7orf25_chr7_42904273_42917070	0/0	g0010	3	3	0	0	0	0	C7orf25	chr7	42904273	42917070
C7orf25_chr7_42904273_42917070	0/0	g0011	2	2	0	0	0	0	C7orf25	chr7	42904273	42917070
C7orf25_chr7_42904273_42917070	0/0	g0012	2	0	0	0	0	2	C7orf25	chr7	42904273	42917070
C7orf25_chr7_42904273_42917070	0/0	g0013	1	0	0	1	0	0	C7orf25	chr7	42904273	42917070
C7orf25_chr7_42904273_42917070	0/0	g0014	1	0	0	1	0	0	C7orf25	chr7	42904273	42917070
C7orf25_chr7_42904273_42917070	0/0	g0015	1	0	1	0	0	0	C7orf25	chr7	42904273	42917070
C7orf25_chr7_42904273_42917070	1/0	g0016	1	0	0	0	0	0	C7orf25	chr7	42904273	42917070
C7orf25_chr7_42904273_42917070	0/0	g0017	1	0	0	1	0	0	C7orf25	chr7	42904273	42917070
C7orf25_chr7_42904273_42917070	0/0	g0018	1	0	0	1	0	0	C7orf25	chr7	42904273	42917070
C7orf25_chr7_42904273_42917070	0/0	g0019	1	0	0	1	0	0	C7orf25	chr7	42904273	42917070
C7orf25_chr7_42904273_42917070	0/0	g0020	1	0	0	1	0	0	C7orf25	chr7	42904273	42917070
C7orf25_chr7_42904273_42917070	0/0	g0021	1	0	1	0	0	0	C7orf25	chr7	42904273	42917070
C7orf25_chr7_42904273_42917070	0/0	g0022	1	0	0	0	0	1	C7orf25	chr7	42904273	42917070
C7orf25_chr7_42904273_42917070	0/0	g0023	1	1	0	0	0	0	C7orf25	chr7	42904273	42917070
C7orf31_chr7_25129692_25185354	0/0	g0001	11	1	0	10	0	0	C7orf31	chr7	25129692	25185354
C7orf31_chr7_25129692_25185354	0/0	g0002	8	1	1	6	0	0	C7orf31	chr7	25129692	25185354
C7orf31_chr7_25129692_25185354	0/0	g0003	7	0	0	7	0	0	C7orf31	chr7	25129692	25185354
C7orf31_chr7_25129692_25185354	0/0	g0004	6	4	2	0	0	0	C7orf31	chr7	25129692	25185354
C7orf31_chr7_25129692_25185354	0/0	g0005	5	0	2	3	0	0	C7orf31	chr7	25129692	25185354
C7orf31_chr7_25129692_25185354	0/0	g0006	5	0	0	5	0	0	C7orf31	chr7	25129692	25185354
C7orf31_chr7_25129692_25185354	0/0	g0007	5	0	0	5	0	0	C7orf31	chr7	25129692	25185354
C7orf31_chr7_25129692_25185354	0/0	g0008	5	0	0	5	0	0	C7orf31	chr7	25129692	25185354
C7orf31_chr7_25129692_25185354	0/0	g0009	4	0	0	3	0	1	C7orf31	chr7	25129692	25185354
C7orf31_chr7_25129692_25185354	0/0	g0010	4	2	2	0	0	0	C7orf31	chr7	25129692	25185354
C7orf31_chr7_25129692_25185354	0/0	g0011	4	0	4	0	0	0	C7orf31	chr7	25129692	25185354
C7orf31_chr7_25129692_25185354	0/0	g0012	4	0	1	1	1	1	C7orf31	chr7	25129692	25185354
C7orf31_chr7_25129692_25185354	0/0	g0013	4	0	0	4	0	0	C7orf31	chr7	25129692	25185354
C7orf31_chr7_25129692_25185354	0/0	g0014	3	0	0	3	0	0	C7orf31	chr7	25129692	25185354
C7orf31_chr7_25129692_25185354	0/0	g0015	3	2	1	0	0	0	C7orf31	chr7	25129692	25185354
C7orf31_chr7_25129692_25185354	0/0	g0016	3	1	2	0	0	0	C7orf31	chr7	25129692	25185354
C7orf31_chr7_25129692_25185354	0/0	g0017	3	0	0	3	0	0	C7orf31	chr7	25129692	25185354
C7orf31_chr7_25129692_25185354	0/0	g0018	3	0	0	3	0	0	C7orf31	chr7	25129692	25185354
C7orf31_chr7_25129692_25185354	0/0	g0019	3	0	2	0	0	1	C7orf31	chr7	25129692	25185354
C7orf31_chr7_25129692_25185354	0/0	g0020	3	3	0	0	0	0	C7orf31	chr7	25129692	25185354
C7orf31_chr7_25129692_25185354	0/0	g0021	3	3	0	0	0	0	C7orf31	chr7	25129692	25185354
C7orf31_chr7_25129692_25185354	0/0	g0022	2	0	0	2	0	0	C7orf31	chr7	25129692	25185354
C7orf31_chr7_25129692_25185354	0/0	g0023	2	0	2	0	0	0	C7orf31	chr7	25129692	25185354
C7orf31_chr7_25129692_25185354	0/0	g0024	2	0	0	2	0	0	C7orf31	chr7	25129692	25185354
C7orf31_chr7_25129692_25185354	0/0	g0025	2	0	0	0	2	0	C7orf31	chr7	25129692	25185354
C7orf31_chr7_25129692_25185354	0/0	g0026	2	1	1	0	0	0	C7orf31	chr7	25129692	25185354
C7orf31_chr7_25129692_25185354	0/0	g0027	2	2	0	0	0	0	C7orf31	chr7	25129692	25185354
C7orf31_chr7_25129692_25185354	0/0	g0028	2	0	2	0	0	0	C7orf31	chr7	25129692	25185354
C7orf31_chr7_25129692_25185354	0/0	g0029	2	0	0	2	0	0	C7orf31	chr7	25129692	25185354
C7orf31_chr7_25129692_25185354	0/0	g0030	2	0	0	2	0	0	C7orf31	chr7	25129692	25185354