JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ACP7_chr19_39079368_39116493	0/0	g0385	1	0	0	1	0	0	ACP7	chr19	39079368	39116493
ACP7_chr19_39079368_39116493	0/0	g0386	1	0	0	1	0	0	ACP7	chr19	39079368	39116493
ACP7_chr19_39079368_39116493	0/0	g0387	1	0	0	1	0	0	ACP7	chr19	39079368	39116493
ACP7_chr19_39079368_39116493	0/0	g0388	1	0	0	1	0	0	ACP7	chr19	39079368	39116493
ACP7_chr19_39079368_39116493	0/0	g0389	1	0	0	0	0	1	ACP7	chr19	39079368	39116493
ACP7_chr19_39079368_39116493	0/0	g0390	1	0	1	0	0	0	ACP7	chr19	39079368	39116493
ACP7_chr19_39079368_39116493	0/0	g0391	1	0	0	1	0	0	ACP7	chr19	39079368	39116493
ACP7_chr19_39079368_39116493	0/0	g0392	1	0	0	1	0	0	ACP7	chr19	39079368	39116493
ACP7_chr19_39079368_39116493	0/0	g0393	1	0	0	1	0	0	ACP7	chr19	39079368	39116493
ACP7_chr19_39079368_39116493	0/0	g0394	1	0	0	1	0	0	ACP7	chr19	39079368	39116493
ACP7_chr19_39079368_39116493	0/0	g0395	1	0	0	1	0	0	ACP7	chr19	39079368	39116493
ACP7_chr19_39079368_39116493	0/0	g0396	1	0	0	1	0	0	ACP7	chr19	39079368	39116493
ACP7_chr19_39079368_39116493	0/0	g0397	1	0	0	1	0	0	ACP7	chr19	39079368	39116493
ACP7_chr19_39079368_39116493	0/0	g0398	1	0	1	0	0	0	ACP7	chr19	39079368	39116493
ACP7_chr19_39079368_39116493	0/0	g0399	1	0	0	0	0	1	ACP7	chr19	39079368	39116493
ACRBP_chr12_6633075_6652432	0/0	g0001	150	17	29	76	8	20	ACRBP	chr12	6633075	6652432
ACRBP_chr12_6633075_6652432	0/0	g0002	58	4	7	44	0	3	ACRBP	chr12	6633075	6652432
ACRBP_chr12_6633075_6652432	0/1	g0003	21	8	6	0	2	4	ACRBP	chr12	6633075	6652432
ACRBP_chr12_6633075_6652432	0/0	g0004	14	0	7	0	3	4	ACRBP	chr12	6633075	6652432
ACRBP_chr12_6633075_6652432	0/0	g0005	13	0	0	13	0	0	ACRBP	chr12	6633075	6652432
ACRBP_chr12_6633075_6652432	0/0	g0006	9	1	6	0	1	1	ACRBP	chr12	6633075	6652432
ACRBP_chr12_6633075_6652432	0/0	g0007	8	8	0	0	0	0	ACRBP	chr12	6633075	6652432
ACRBP_chr12_6633075_6652432	0/0	g0008	7	0	0	7	0	0	ACRBP	chr12	6633075	6652432
ACRBP_chr12_6633075_6652432	0/0	g0009	7	6	1	0	0	0	ACRBP	chr12	6633075	6652432
ACRBP_chr12_6633075_6652432	0/0	g0010	6	0	0	6	0	0	ACRBP	chr12	6633075	6652432
ACRBP_chr12_6633075_6652432	0/0	g0011	6	1	0	2	0	3	ACRBP	chr12	6633075	6652432
ACRBP_chr12_6633075_6652432	0/0	g0012	5	5	0	0	0	0	ACRBP	chr12	6633075	6652432
ACRBP_chr12_6633075_6652432	0/0	g0013	5	1	0	3	1	0	ACRBP	chr12	6633075	6652432
ACRBP_chr12_6633075_6652432	0/0	g0014	5	5	0	0	0	0	ACRBP	chr12	6633075	6652432
ACRBP_chr12_6633075_6652432	0/0	g0015	4	2	0	2	0	0	ACRBP	chr12	6633075	6652432
ACRBP_chr12_6633075_6652432	0/0	g0016	4	0	2	0	0	2	ACRBP	chr12	6633075	6652432
ACRBP_chr12_6633075_6652432	0/0	g0017	4	1	0	3	0	0	ACRBP	chr12	6633075	6652432
ACRBP_chr12_6633075_6652432	0/0	g0018	4	0	2	2	0	0	ACRBP	chr12	6633075	6652432
ACRBP_chr12_6633075_6652432	1/0	g0019	4	3	0	0	0	0	ACRBP	chr12	6633075	6652432
ACRBP_chr12_6633075_6652432	0/0	g0020	3	3	0	0	0	0	ACRBP	chr12	6633075	6652432
ACRBP_chr12_6633075_6652432	0/0	g0021	3	3	0	0	0	0	ACRBP	chr12	6633075	6652432
ACRBP_chr12_6633075_6652432	0/0	g0022	3	3	0	0	0	0	ACRBP	chr12	6633075	6652432
ACRBP_chr12_6633075_6652432	0/0	g0023	3	0	2	0	0	1	ACRBP	chr12	6633075	6652432
ACRBP_chr12_6633075_6652432	0/0	g0024	3	0	1	2	0	0	ACRBP	chr12	6633075	6652432
ACRBP_chr12_6633075_6652432	0/0	g0025	3	0	0	3	0	0	ACRBP	chr12	6633075	6652432
ACRBP_chr12_6633075_6652432	0/0	g0026	2	0	0	2	0	0	ACRBP	chr12	6633075	6652432
ACRBP_chr12_6633075_6652432	0/0	g0027	2	0	0	2	0	0	ACRBP	chr12	6633075	6652432
ACRBP_chr12_6633075_6652432	0/0	g0028	2	0	0	2	0	0	ACRBP	chr12	6633075	6652432
ACRBP_chr12_6633075_6652432	0/0	g0029	2	0	0	0	1	1	ACRBP	chr12	6633075	6652432
ACRBP_chr12_6633075_6652432	0/0	g0030	2	0	2	0	0	0	ACRBP	chr12	6633075	6652432
ACRBP_chr12_6633075_6652432	0/0	g0031	2	0	1	0	0	1	ACRBP	chr12	6633075	6652432
ACRBP_chr12_6633075_6652432	0/0	g0032	2	0	1	1	0	0	ACRBP	chr12	6633075	6652432
ACRBP_chr12_6633075_6652432	0/0	g0033	2	0	0	1	0	1	ACRBP	chr12	6633075	6652432
ACRBP_chr12_6633075_6652432	0/0	g0034	2	1	1	0	0	0	ACRBP	chr12	6633075	6652432
ACRBP_chr12_6633075_6652432	0/0	g0035	2	2	0	0	0	0	ACRBP	chr12	6633075	6652432