JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
C8B_chr1_56924207_56971015	0/0	g0275	1	0	0	1	0	0	C8B	chr1	56924207	56971015
C8B_chr1_56924207_56971015	0/0	g0276	1	0	0	1	0	0	C8B	chr1	56924207	56971015
C8B_chr1_56924207_56971015	0/0	g0277	1	0	0	1	0	0	C8B	chr1	56924207	56971015
C8B_chr1_56924207_56971015	0/0	g0278	1	0	1	0	0	0	C8B	chr1	56924207	56971015
C8B_chr1_56924207_56971015	0/0	g0279	1	0	0	1	0	0	C8B	chr1	56924207	56971015
C8B_chr1_56924207_56971015	0/0	g0280	1	0	0	1	0	0	C8B	chr1	56924207	56971015
C8B_chr1_56924207_56971015	0/0	g0281	1	0	0	1	0	0	C8B	chr1	56924207	56971015
C8B_chr1_56924207_56971015	0/0	g0282	1	0	0	0	1	0	C8B	chr1	56924207	56971015
C8B_chr1_56924207_56971015	0/0	g0283	1	0	0	1	0	0	C8B	chr1	56924207	56971015
C8B_chr1_56924207_56971015	0/0	g0284	1	0	0	1	0	0	C8B	chr1	56924207	56971015
C8B_chr1_56924207_56971015	0/0	g0285	1	0	0	1	0	0	C8B	chr1	56924207	56971015
C8B_chr1_56924207_56971015	0/0	g0286	1	1	0	0	0	0	C8B	chr1	56924207	56971015
C8B_chr1_56924207_56971015	0/0	g0287	1	0	0	0	0	1	C8B	chr1	56924207	56971015
C8B_chr1_56924207_56971015	0/0	g0288	1	0	0	1	0	0	C8B	chr1	56924207	56971015
C8B_chr1_56924207_56971015	0/0	g0289	1	0	0	1	0	0	C8B	chr1	56924207	56971015
C8B_chr1_56924207_56971015	0/0	g0290	1	0	0	0	0	1	C8B	chr1	56924207	56971015
C8B_chr1_56924207_56971015	0/0	g0291	1	0	0	1	0	0	C8B	chr1	56924207	56971015
C8B_chr1_56924207_56971015	0/0	g0292	1	0	0	1	0	0	C8B	chr1	56924207	56971015
C8B_chr1_56924207_56971015	0/0	g0293	1	0	0	1	0	0	C8B	chr1	56924207	56971015
C8B_chr1_56924207_56971015	0/0	g0294	1	0	0	1	0	0	C8B	chr1	56924207	56971015
C8B_chr1_56924207_56971015	0/0	g0295	1	0	0	1	0	0	C8B	chr1	56924207	56971015
C8B_chr1_56924207_56971015	0/0	g0296	1	1	0	0	0	0	C8B	chr1	56924207	56971015
C8B_chr1_56924207_56971015	0/0	g0297	1	0	0	1	0	0	C8B	chr1	56924207	56971015
C8B_chr1_56924207_56971015	0/0	g0298	1	1	0	0	0	0	C8B	chr1	56924207	56971015
C8B_chr1_56924207_56971015	0/0	g0299	1	1	0	0	0	0	C8B	chr1	56924207	56971015
C8B_chr1_56924207_56971015	0/0	g0300	1	1	0	0	0	0	C8B	chr1	56924207	56971015
C8B_chr1_56924207_56971015	0/0	g0301	1	1	0	0	0	0	C8B	chr1	56924207	56971015
C8B_chr1_56924207_56971015	0/0	g0302	1	1	0	0	0	0	C8B	chr1	56924207	56971015
C8B_chr1_56924207_56971015	0/0	g0303	1	0	0	0	0	1	C8B	chr1	56924207	56971015
C8B_chr1_56924207_56971015	0/0	g0304	1	0	1	0	0	0	C8B	chr1	56924207	56971015
C8B_chr1_56924207_56971015	0/0	g0305	1	0	0	0	0	1	C8B	chr1	56924207	56971015
C8G_chr9_136940243_136951975	0/1	g0001	264	65	35	135	3	25	C8G	chr9	136940243	136951975
C8G_chr9_136940243_136951975	0/0	g0002	90	3	35	28	9	15	C8G	chr9	136940243	136951975
C8G_chr9_136940243_136951975	0/0	g0003	31	14	6	5	4	2	C8G	chr9	136940243	136951975
C8G_chr9_136940243_136951975	1/0	g0004	8	4	1	0	1	1	C8G	chr9	136940243	136951975
C8G_chr9_136940243_136951975	0/0	g0005	7	0	3	0	1	3	C8G	chr9	136940243	136951975
C8G_chr9_136940243_136951975	0/0	g0006	3	3	0	0	0	0	C8G	chr9	136940243	136951975
C8G_chr9_136940243_136951975	0/0	g0007	2	0	0	0	0	2	C8G	chr9	136940243	136951975
C8G_chr9_136940243_136951975	0/0	g0008	2	0	0	2	0	0	C8G	chr9	136940243	136951975
C8G_chr9_136940243_136951975	0/0	g0009	2	2	0	0	0	0	C8G	chr9	136940243	136951975
C8G_chr9_136940243_136951975	0/0	g0010	1	0	0	1	0	0	C8G	chr9	136940243	136951975
C8G_chr9_136940243_136951975	0/0	g0011	1	1	0	0	0	0	C8G	chr9	136940243	136951975
C8G_chr9_136940243_136951975	0/0	g0012	1	0	1	0	0	0	C8G	chr9	136940243	136951975
C8G_chr9_136940243_136951975	0/0	g0013	1	0	0	1	0	0	C8G	chr9	136940243	136951975
C8G_chr9_136940243_136951975	0/0	g0014	1	1	0	0	0	0	C8G	chr9	136940243	136951975
C8G_chr9_136940243_136951975	0/0	g0015	1	0	1	0	0	0	C8G	chr9	136940243	136951975
C8G_chr9_136940243_136951975	0/0	g0016	1	1	0	0	0	0	C8G	chr9	136940243	136951975
C8orf33_chr8_145047467_145061030	1/1	g0001	365	59	64	193	15	32	C8orf33	chr8	145047467	145061030
C8orf33_chr8_145047467_145061030	0/0	g0002	20	19	0	0	0	1	C8orf33	chr8	145047467	145061030
C8orf33_chr8_145047467_145061030	0/0	g0003	9	4	0	2	0	3	C8orf33	chr8	145047467	145061030