JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
CABP1_chr12_120635626_120672324	0/0	g0264	1	1	0	0	0	0	CABP1	chr12	120635626	120672324
CABP1_chr12_120635626_120672324	0/0	g0265	1	1	0	0	0	0	CABP1	chr12	120635626	120672324
CABP1_chr12_120635626_120672324	0/0	g0266	1	1	0	0	0	0	CABP1	chr12	120635626	120672324
CABP1_chr12_120635626_120672324	0/0	g0267	1	0	1	0	0	0	CABP1	chr12	120635626	120672324
CABP1_chr12_120635626_120672324	0/0	g0268	1	0	0	0	0	1	CABP1	chr12	120635626	120672324
CABP1_chr12_120635626_120672324	0/0	g0269	1	0	0	0	0	1	CABP1	chr12	120635626	120672324
CABP1_chr12_120635626_120672324	0/0	g0270	1	1	0	0	0	0	CABP1	chr12	120635626	120672324
CABP1_chr12_120635626_120672324	0/0	g0271	1	0	0	0	0	1	CABP1	chr12	120635626	120672324
CABP1_chr12_120635626_120672324	0/0	g0272	1	1	0	0	0	0	CABP1	chr12	120635626	120672324
CABP1_chr12_120635626_120672324	0/0	g0273	1	1	0	0	0	0	CABP1	chr12	120635626	120672324
CABP1_chr12_120635626_120672324	0/0	g0274	1	1	0	0	0	0	CABP1	chr12	120635626	120672324
CABP1_chr12_120635626_120672324	0/0	g0275	1	1	0	0	0	0	CABP1	chr12	120635626	120672324
CABP1_chr12_120635626_120672324	0/0	g0276	1	0	0	1	0	0	CABP1	chr12	120635626	120672324
CABP1_chr12_120635626_120672324	0/0	g0277	1	0	1	0	0	0	CABP1	chr12	120635626	120672324
CABP1_chr12_120635626_120672324	0/0	g0278	1	0	0	0	1	0	CABP1	chr12	120635626	120672324
CABP1_chr12_120635626_120672324	0/0	g0279	1	1	0	0	0	0	CABP1	chr12	120635626	120672324
CABP1_chr12_120635626_120672324	0/0	g0280	1	1	0	0	0	0	CABP1	chr12	120635626	120672324
CABP1_chr12_120635626_120672324	0/0	g0281	1	1	0	0	0	0	CABP1	chr12	120635626	120672324
CABP1_chr12_120635626_120672324	0/0	g0282	1	1	0	0	0	0	CABP1	chr12	120635626	120672324
CABP1_chr12_120635626_120672324	0/0	g0283	1	1	0	0	0	0	CABP1	chr12	120635626	120672324
CABP1_chr12_120635626_120672324	0/0	g0284	1	1	0	0	0	0	CABP1	chr12	120635626	120672324
CABP1_chr12_120635626_120672324	0/0	g0285	1	1	0	0	0	0	CABP1	chr12	120635626	120672324
CABP1_chr12_120635626_120672324	0/0	g0286	1	1	0	0	0	0	CABP1	chr12	120635626	120672324
CABP1_chr12_120635626_120672324	0/0	g0287	1	0	1	0	0	0	CABP1	chr12	120635626	120672324
CABP1_chr12_120635626_120672324	0/0	g0288	1	1	0	0	0	0	CABP1	chr12	120635626	120672324
CABP1_chr12_120635626_120672324	0/0	g0289	1	1	0	0	0	0	CABP1	chr12	120635626	120672324
CABP1_chr12_120635626_120672324	0/0	g0290	1	1	0	0	0	0	CABP1	chr12	120635626	120672324
CABP1_chr12_120635626_120672324	0/0	g0291	1	0	1	0	0	0	CABP1	chr12	120635626	120672324
CABP1_chr12_120635626_120672324	0/0	g0292	1	1	0	0	0	0	CABP1	chr12	120635626	120672324
CABP1_chr12_120635626_120672324	0/0	g0293	1	1	0	0	0	0	CABP1	chr12	120635626	120672324
CABP1_chr12_120635626_120672324	0/0	g0294	1	0	0	1	0	0	CABP1	chr12	120635626	120672324
CABP1_chr12_120635626_120672324	0/0	g0295	1	0	0	1	0	0	CABP1	chr12	120635626	120672324
CABP1_chr12_120635626_120672324	0/0	g0296	1	0	0	0	0	1	CABP1	chr12	120635626	120672324
CABP1_chr12_120635626_120672324	0/0	g0297	1	0	0	0	0	1	CABP1	chr12	120635626	120672324
CABP1_chr12_120635626_120672324	0/0	g0298	1	0	0	0	0	1	CABP1	chr12	120635626	120672324
CABP1_chr12_120635626_120672324	0/0	g0299	1	0	0	0	0	1	CABP1	chr12	120635626	120672324
CABP1_chr12_120635626_120672324	0/0	g0300	1	0	1	0	0	0	CABP1	chr12	120635626	120672324
CABP2_chr11_67513912_67528446	0/0	g0001	141	56	37	31	6	11	CABP2	chr11	67513912	67528446
CABP2_chr11_67513912_67528446	0/1	g0002	130	2	29	66	6	26	CABP2	chr11	67513912	67528446
CABP2_chr11_67513912_67528446	1/0	g0003	35	2	0	29	1	2	CABP2	chr11	67513912	67528446
CABP2_chr11_67513912_67528446	0/0	g0004	20	20	0	0	0	0	CABP2	chr11	67513912	67528446
CABP2_chr11_67513912_67528446	0/0	g0005	4	0	0	4	0	0	CABP2	chr11	67513912	67528446
CABP2_chr11_67513912_67528446	0/0	g0006	3	1	0	0	2	0	CABP2	chr11	67513912	67528446
CABP2_chr11_67513912_67528446	0/0	g0007	3	0	0	3	0	0	CABP2	chr11	67513912	67528446
CABP2_chr11_67513912_67528446	0/0	g0008	3	3	0	0	0	0	CABP2	chr11	67513912	67528446
CABP2_chr11_67513912_67528446	0/0	g0009	3	3	0	0	0	0	CABP2	chr11	67513912	67528446
CABP2_chr11_67513912_67528446	0/0	g0010	2	0	0	2	0	0	CABP2	chr11	67513912	67528446
CABP2_chr11_67513912_67528446	0/0	g0011	2	0	0	2	0	0	CABP2	chr11	67513912	67528446
CABP2_chr11_67513912_67528446	0/0	g0012	2	0	0	0	0	2	CABP2	chr11	67513912	67528446
CABP2_chr11_67513912_67528446	0/0	g0013	2	0	2	0	0	0	CABP2	chr11	67513912	67528446