JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
CABP2_chr11_67513912_67528446	0/0	g0014	2	0	1	0	1	0	CABP2	chr11	67513912	67528446
CABP2_chr11_67513912_67528446	0/0	g0015	2	0	0	2	0	0	CABP2	chr11	67513912	67528446
CABP2_chr11_67513912_67528446	0/0	g0016	1	0	0	1	0	0	CABP2	chr11	67513912	67528446
CABP2_chr11_67513912_67528446	0/0	g0017	1	1	0	0	0	0	CABP2	chr11	67513912	67528446
CABP2_chr11_67513912_67528446	0/0	g0018	1	0	0	1	0	0	CABP2	chr11	67513912	67528446
CABP2_chr11_67513912_67528446	0/0	g0019	1	0	1	0	0	0	CABP2	chr11	67513912	67528446
CABP2_chr11_67513912_67528446	0/0	g0020	1	0	0	1	0	0	CABP2	chr11	67513912	67528446
CABP2_chr11_67513912_67528446	0/0	g0021	1	0	0	1	0	0	CABP2	chr11	67513912	67528446
CABP2_chr11_67513912_67528446	0/0	g0022	1	0	0	1	0	0	CABP2	chr11	67513912	67528446
CABP2_chr11_67513912_67528446	0/0	g0023	1	0	1	0	0	0	CABP2	chr11	67513912	67528446
CABP2_chr11_67513912_67528446	0/0	g0024	1	0	1	0	0	0	CABP2	chr11	67513912	67528446
CABP2_chr11_67513912_67528446	0/0	g0025	1	1	0	0	0	0	CABP2	chr11	67513912	67528446
CABP2_chr11_67513912_67528446	0/0	g0026	1	1	0	0	0	0	CABP2	chr11	67513912	67528446
CABP2_chr11_67513912_67528446	0/0	g0027	1	1	0	0	0	0	CABP2	chr11	67513912	67528446
CABP2_chr11_67513912_67528446	0/0	g0028	1	0	0	1	0	0	CABP2	chr11	67513912	67528446
CABP2_chr11_67513912_67528446	0/0	g0029	1	0	0	1	0	0	CABP2	chr11	67513912	67528446
CABP2_chr11_67513912_67528446	0/0	g0030	1	0	0	0	0	1	CABP2	chr11	67513912	67528446
CABP2_chr11_67513912_67528446	0/0	g0031	1	0	0	1	0	0	CABP2	chr11	67513912	67528446
CABP2_chr11_67513912_67528446	0/0	g0032	1	0	0	1	0	0	CABP2	chr11	67513912	67528446
CABP2_chr11_67513912_67528446	0/0	g0033	1	1	0	0	0	0	CABP2	chr11	67513912	67528446
CABP2_chr11_67513912_67528446	0/0	g0034	1	1	0	0	0	0	CABP2	chr11	67513912	67528446
CABP2_chr11_67513912_67528446	0/0	g0035	1	1	0	0	0	0	CABP2	chr11	67513912	67528446
CABP4_chr11_67450354_67466752	1/1	g0001	155	14	22	88	5	24	CABP4	chr11	67450354	67466752
CABP4_chr11_67450354_67466752	0/0	g0002	48	10	12	14	7	5	CABP4	chr11	67450354	67466752
CABP4_chr11_67450354_67466752	0/0	g0003	31	8	22	1	0	0	CABP4	chr11	67450354	67466752
CABP4_chr11_67450354_67466752	0/0	g0004	29	1	3	22	1	2	CABP4	chr11	67450354	67466752
CABP4_chr11_67450354_67466752	0/0	g0005	27	26	1	0	0	0	CABP4	chr11	67450354	67466752
CABP4_chr11_67450354_67466752	0/0	g0006	22	21	1	0	0	0	CABP4	chr11	67450354	67466752
CABP4_chr11_67450354_67466752	0/0	g0007	15	2	0	13	0	0	CABP4	chr11	67450354	67466752
CABP4_chr11_67450354_67466752	0/0	g0008	13	0	1	11	0	1	CABP4	chr11	67450354	67466752
CABP4_chr11_67450354_67466752	0/0	g0009	5	4	1	0	0	0	CABP4	chr11	67450354	67466752
CABP4_chr11_67450354_67466752	0/0	g0010	4	4	0	0	0	0	CABP4	chr11	67450354	67466752
CABP4_chr11_67450354_67466752	0/0	g0011	4	0	0	4	0	0	CABP4	chr11	67450354	67466752
CABP4_chr11_67450354_67466752	0/0	g0012	3	1	1	0	1	0	CABP4	chr11	67450354	67466752
CABP4_chr11_67450354_67466752	0/0	g0013	2	0	0	2	0	0	CABP4	chr11	67450354	67466752
CABP4_chr11_67450354_67466752	0/0	g0014	2	0	2	0	0	0	CABP4	chr11	67450354	67466752
CABP4_chr11_67450354_67466752	0/0	g0015	2	2	0	0	0	0	CABP4	chr11	67450354	67466752
CABP4_chr11_67450354_67466752	0/0	g0016	1	1	0	0	0	0	CABP4	chr11	67450354	67466752
CABP4_chr11_67450354_67466752	0/0	g0017	1	0	0	0	0	1	CABP4	chr11	67450354	67466752
CABP4_chr11_67450354_67466752	0/0	g0018	1	0	0	1	0	0	CABP4	chr11	67450354	67466752
CABP4_chr11_67450354_67466752	0/0	g0019	1	0	0	0	0	1	CABP4	chr11	67450354	67466752
CABP4_chr11_67450354_67466752	0/0	g0020	1	0	0	1	0	0	CABP4	chr11	67450354	67466752
CABP4_chr11_67450354_67466752	0/0	g0021	1	0	0	1	0	0	CABP4	chr11	67450354	67466752
CABP5_chr19_48024383_48049079	0/0	g0001	14	1	3	9	0	1	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	g0002	10	0	1	9	0	0	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	g0003	7	0	4	2	0	1	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	g0004	6	0	3	2	0	1	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	g0005	4	0	2	2	0	0	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	g0006	4	0	0	4	0	0	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	g0007	4	1	1	1	1	0	CABP5	chr19	48024383	48049079