JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
CABP5_chr19_48024383_48049079	0/0	g0258	1	0	0	0	0	1	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	g0259	1	0	0	0	1	0	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	g0260	1	0	0	1	0	0	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	g0261	1	1	0	0	0	0	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	g0262	1	1	0	0	0	0	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	g0263	1	1	0	0	0	0	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	g0264	1	1	0	0	0	0	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	g0265	1	0	0	1	0	0	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	g0266	1	1	0	0	0	0	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	g0267	1	1	0	0	0	0	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	g0268	1	0	1	0	0	0	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	g0269	1	0	0	1	0	0	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	g0270	1	0	0	1	0	0	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	g0271	1	0	0	1	0	0	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	g0272	1	0	0	0	0	1	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	g0273	1	0	0	0	0	1	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	g0274	1	0	0	1	0	0	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	g0275	1	0	0	1	0	0	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	g0276	1	0	1	0	0	0	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	g0277	1	0	0	0	1	0	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	g0278	1	0	0	1	0	0	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	g0279	1	0	0	1	0	0	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	g0280	1	0	0	1	0	0	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	g0281	1	0	0	1	0	0	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	g0282	1	0	0	1	0	0	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	g0283	1	0	0	1	0	0	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	g0284	1	1	0	0	0	0	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	g0285	1	0	0	1	0	0	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	g0286	1	1	0	0	0	0	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	g0287	1	1	0	0	0	0	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	1/0	g0288	1	0	0	0	0	0	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	g0289	1	1	0	0	0	0	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	g0290	1	1	0	0	0	0	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	g0291	1	1	0	0	0	0	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	g0292	1	0	0	0	0	1	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	g0293	1	0	0	0	1	0	CABP5	chr19	48024383	48049079
CABP5_chr19_48024383_48049079	0/0	g0294	1	0	0	0	0	1	CABP5	chr19	48024383	48049079
CABP7_chr22_29715003_29736833	0/0	g0001	48	1	0	45	0	2	CABP7	chr22	29715003	29736833
CABP7_chr22_29715003_29736833	0/0	g0002	31	1	0	29	1	0	CABP7	chr22	29715003	29736833
CABP7_chr22_29715003_29736833	0/0	g0003	31	1	5	22	1	2	CABP7	chr22	29715003	29736833
CABP7_chr22_29715003_29736833	0/0	g0004	26	0	3	15	0	8	CABP7	chr22	29715003	29736833
CABP7_chr22_29715003_29736833	0/0	g0005	25	0	1	16	0	8	CABP7	chr22	29715003	29736833
CABP7_chr22_29715003_29736833	1/1	g0006	17	0	11	0	1	3	CABP7	chr22	29715003	29736833
CABP7_chr22_29715003_29736833	0/0	g0007	15	15	0	0	0	0	CABP7	chr22	29715003	29736833
CABP7_chr22_29715003_29736833	0/0	g0008	12	11	1	0	0	0	CABP7	chr22	29715003	29736833
CABP7_chr22_29715003_29736833	0/0	g0009	10	1	1	6	0	2	CABP7	chr22	29715003	29736833
CABP7_chr22_29715003_29736833	0/0	g0010	10	1	5	0	1	3	CABP7	chr22	29715003	29736833
CABP7_chr22_29715003_29736833	0/0	g0011	9	0	6	0	3	0	CABP7	chr22	29715003	29736833
CABP7_chr22_29715003_29736833	0/0	g0012	9	0	8	0	1	0	CABP7	chr22	29715003	29736833
CABP7_chr22_29715003_29736833	0/0	g0013	8	7	1	0	0	0	CABP7	chr22	29715003	29736833