JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	SAS	genename	chr	start	end
CADPS2_chr7_122313411_122891460	0/0	g0089	1	1	0	0	0	CADPS2	chr7	122313411	122891460
CADPS2_chr7_122313411_122891460	0/0	g0090	1	0	1	0	0	CADPS2	chr7	122313411	122891460
CADPS2_chr7_122313411_122891460	0/0	g0091	1	1	0	0	0	CADPS2	chr7	122313411	122891460
CADPS2_chr7_122313411_122891460	0/0	g0092	1	1	0	0	0	CADPS2	chr7	122313411	122891460
CADPS2_chr7_122313411_122891460	0/0	g0093	1	0	1	0	0	CADPS2	chr7	122313411	122891460
CADPS2_chr7_122313411_122891460	0/0	g0094	1	0	0	0	1	CADPS2	chr7	122313411	122891460
CADPS2_chr7_122313411_122891460	0/0	g0095	1	1	0	0	0	CADPS2	chr7	122313411	122891460
CADPS2_chr7_122313411_122891460	0/0	g0096	1	1	0	0	0	CADPS2	chr7	122313411	122891460
CADPS2_chr7_122313411_122891460	0/0	g0097	1	0	0	0	1	CADPS2	chr7	122313411	122891460
CADPS2_chr7_122313411_122891460	0/0	g0098	1	1	0	0	0	CADPS2	chr7	122313411	122891460
CADPS2_chr7_122313411_122891460	0/0	g0099	1	1	0	0	0	CADPS2	chr7	122313411	122891460
CADPS2_chr7_122313411_122891460	0/0	g0100	1	1	0	0	0	CADPS2	chr7	122313411	122891460
CADPS2_chr7_122313411_122891460	0/0	g0101	1	1	0	0	0	CADPS2	chr7	122313411	122891460
CADPS2_chr7_122313411_122891460	0/0	g0102	1	1	0	0	0	CADPS2	chr7	122313411	122891460
CADPS2_chr7_122313411_122891460	0/0	g0103	1	1	0	0	0	CADPS2	chr7	122313411	122891460
CADPS2_chr7_122313411_122891460	0/0	g0104	1	0	1	0	0	CADPS2	chr7	122313411	122891460
CADPS2_chr7_122313411_122891460	0/0	g0105	1	0	1	0	0	CADPS2	chr7	122313411	122891460
CADPS2_chr7_122313411_122891460	0/0	g0106	1	1	0	0	0	CADPS2	chr7	122313411	122891460
CADPS2_chr7_122313411_122891460	0/0	g0107	1	1	0	0	0	CADPS2	chr7	122313411	122891460
CADPS2_chr7_122313411_122891460	0/0	g0108	1	0	0	0	1	CADPS2	chr7	122313411	122891460
CADPS2_chr7_122313411_122891460	0/0	g0109	1	0	0	0	1	CADPS2	chr7	122313411	122891460
CADPS2_chr7_122313411_122891460	0/0	g0110	1	0	1	0	0	CADPS2	chr7	122313411	122891460
CADPS2_chr7_122313411_122891460	0/0	g0111	1	0	0	0	1	CADPS2	chr7	122313411	122891460
CADPS2_chr7_122313411_122891460	0/0	g0112	1	0	1	0	0	CADPS2	chr7	122313411	122891460
CADPS2_chr7_122313411_122891460	0/0	g0113	1	0	1	0	0	CADPS2	chr7	122313411	122891460
CADPS2_chr7_122313411_122891460	0/0	g0114	1	1	0	0	0	CADPS2	chr7	122313411	122891460
CADPS2_chr7_122313411_122891460	0/0	g0115	1	0	0	1	0	CADPS2	chr7	122313411	122891460
CADPS2_chr7_122313411_122891460	0/0	g0116	1	0	0	1	0	CADPS2	chr7	122313411	122891460
CADPS2_chr7_122313411_122891460	0/0	g0117	1	0	0	0	1	CADPS2	chr7	122313411	122891460
CADPS2_chr7_122313411_122891460	0/0	g0118	1	1	0	0	0	CADPS2	chr7	122313411	122891460
CADPS2_chr7_122313411_122891460	0/0	g0119	1	1	0	0	0	CADPS2	chr7	122313411	122891460
CADPS2_chr7_122313411_122891460	0/0	g0120	1	1	0	0	0	CADPS2	chr7	122313411	122891460
CADPS2_chr7_122313411_122891460	0/0	g0121	1	0	0	1	0	CADPS2	chr7	122313411	122891460
CADPS2_chr7_122313411_122891460	0/0	g0122	1	1	0	0	0	CADPS2	chr7	122313411	122891460
CADPS2_chr7_122313411_122891460	0/0	g0123	1	1	0	0	0	CADPS2	chr7	122313411	122891460
CADPS2_chr7_122313411_122891460	0/0	g0124	1	0	1	0	0	CADPS2	chr7	122313411	122891460
CADPS2_chr7_122313411_122891460	0/0	g0125	1	1	0	0	0	CADPS2	chr7	122313411	122891460
CADPS2_chr7_122313411_122891460	0/0	g0126	1	1	0	0	0	CADPS2	chr7	122313411	122891460
CADPS_chr3_62393348_62880416	0/0	g0001	1	0	1	0	0	CADPS	chr3	62393348	62880416
CADPS_chr3_62393348_62880416	0/0	g0002	1	0	0	0	1	CADPS	chr3	62393348	62880416
CADPS_chr3_62393348_62880416	0/0	g0003	1	0	1	0	0	CADPS	chr3	62393348	62880416
CADPS_chr3_62393348_62880416	0/0	g0004	1	0	0	1	0	CADPS	chr3	62393348	62880416
CADPS_chr3_62393348_62880416	0/0	g0005	1	1	0	0	0	CADPS	chr3	62393348	62880416
CADPS_chr3_62393348_62880416	0/0	g0006	1	1	0	0	0	CADPS	chr3	62393348	62880416
CADPS_chr3_62393348_62880416	0/0	g0007	1	1	0	0	0	CADPS	chr3	62393348	62880416
CADPS_chr3_62393348_62880416	0/0	g0008	1	0	0	1	0	CADPS	chr3	62393348	62880416
CADPS_chr3_62393348_62880416	0/0	g0009	1	0	0	1	0	CADPS	chr3	62393348	62880416
CADPS_chr3_62393348_62880416	0/0	g0010	1	1	0	0	0	CADPS	chr3	62393348	62880416
CADPS_chr3_62393348_62880416	0/0	g0011	1	0	0	1	0	CADPS	chr3	62393348	62880416
CADPS_chr3_62393348_62880416	0/0	g0012	1	0	0	0	1	CADPS	chr3	62393348	62880416