JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
CAMK1G_chr1_209578714_209618939	0/0	g0332	1	0	0	1	0	0	CAMK1G	chr1	209578714	209618939
CAMK1G_chr1_209578714_209618939	0/0	g0333	1	0	0	0	1	0	CAMK1G	chr1	209578714	209618939
CAMK1G_chr1_209578714_209618939	0/0	g0334	1	0	1	0	0	0	CAMK1G	chr1	209578714	209618939
CAMK1G_chr1_209578714_209618939	0/0	g0335	1	0	0	1	0	0	CAMK1G	chr1	209578714	209618939
CAMK1G_chr1_209578714_209618939	0/0	g0336	1	0	0	0	0	1	CAMK1G	chr1	209578714	209618939
CAMK1G_chr1_209578714_209618939	0/0	g0337	1	0	1	0	0	0	CAMK1G	chr1	209578714	209618939
CAMK1G_chr1_209578714_209618939	0/0	g0338	1	0	0	1	0	0	CAMK1G	chr1	209578714	209618939
CAMK1G_chr1_209578714_209618939	0/0	g0339	1	0	0	1	0	0	CAMK1G	chr1	209578714	209618939
CAMK1G_chr1_209578714_209618939	0/0	g0340	1	1	0	0	0	0	CAMK1G	chr1	209578714	209618939
CAMK1G_chr1_209578714_209618939	0/0	g0341	1	1	0	0	0	0	CAMK1G	chr1	209578714	209618939
CAMK1G_chr1_209578714_209618939	0/0	g0342	1	1	0	0	0	0	CAMK1G	chr1	209578714	209618939
CAMK1G_chr1_209578714_209618939	0/0	g0343	1	1	0	0	0	0	CAMK1G	chr1	209578714	209618939
CAMK1G_chr1_209578714_209618939	0/0	g0344	1	1	0	0	0	0	CAMK1G	chr1	209578714	209618939
CAMK1G_chr1_209578714_209618939	0/0	g0345	1	1	0	0	0	0	CAMK1G	chr1	209578714	209618939
CAMK1G_chr1_209578714_209618939	0/0	g0346	1	1	0	0	0	0	CAMK1G	chr1	209578714	209618939
CAMK1_chr3_9752347_9774947	0/0	g0001	40	0	2	31	2	5	CAMK1	chr3	9752347	9774947
CAMK1_chr3_9752347_9774947	0/1	g0002	34	1	2	25	0	5	CAMK1	chr3	9752347	9774947
CAMK1_chr3_9752347_9774947	0/0	g0003	34	2	10	19	2	1	CAMK1	chr3	9752347	9774947
CAMK1_chr3_9752347_9774947	0/0	g0004	24	5	4	12	0	3	CAMK1	chr3	9752347	9774947
CAMK1_chr3_9752347_9774947	0/0	g0005	19	6	3	5	0	5	CAMK1	chr3	9752347	9774947
CAMK1_chr3_9752347_9774947	0/0	g0006	15	2	3	10	0	0	CAMK1	chr3	9752347	9774947
CAMK1_chr3_9752347_9774947	0/0	g0007	12	2	4	3	2	1	CAMK1	chr3	9752347	9774947
CAMK1_chr3_9752347_9774947	0/0	g0008	9	2	1	4	1	1	CAMK1	chr3	9752347	9774947
CAMK1_chr3_9752347_9774947	0/0	g0009	8	0	2	5	0	1	CAMK1	chr3	9752347	9774947
CAMK1_chr3_9752347_9774947	1/0	g0010	8	0	1	6	0	0	CAMK1	chr3	9752347	9774947
CAMK1_chr3_9752347_9774947	0/0	g0011	8	8	0	0	0	0	CAMK1	chr3	9752347	9774947
CAMK1_chr3_9752347_9774947	0/0	g0012	8	0	8	0	0	0	CAMK1	chr3	9752347	9774947
CAMK1_chr3_9752347_9774947	0/0	g0013	5	1	1	2	0	1	CAMK1	chr3	9752347	9774947
CAMK1_chr3_9752347_9774947	0/0	g0014	5	0	3	2	0	0	CAMK1	chr3	9752347	9774947
CAMK1_chr3_9752347_9774947	0/0	g0015	5	1	1	3	0	0	CAMK1	chr3	9752347	9774947
CAMK1_chr3_9752347_9774947	0/0	g0016	5	1	0	4	0	0	CAMK1	chr3	9752347	9774947
CAMK1_chr3_9752347_9774947	0/0	g0017	5	3	0	1	0	1	CAMK1	chr3	9752347	9774947
CAMK1_chr3_9752347_9774947	0/0	g0018	5	5	0	0	0	0	CAMK1	chr3	9752347	9774947
CAMK1_chr3_9752347_9774947	0/0	g0019	4	0	1	3	0	0	CAMK1	chr3	9752347	9774947
CAMK1_chr3_9752347_9774947	0/0	g0020	4	0	0	2	0	2	CAMK1	chr3	9752347	9774947
CAMK1_chr3_9752347_9774947	0/0	g0021	4	0	3	0	1	0	CAMK1	chr3	9752347	9774947
CAMK1_chr3_9752347_9774947	0/0	g0022	4	0	2	0	2	0	CAMK1	chr3	9752347	9774947
CAMK1_chr3_9752347_9774947	0/0	g0023	4	0	0	4	0	0	CAMK1	chr3	9752347	9774947
CAMK1_chr3_9752347_9774947	0/0	g0024	4	1	3	0	0	0	CAMK1	chr3	9752347	9774947
CAMK1_chr3_9752347_9774947	0/0	g0025	3	0	0	2	1	0	CAMK1	chr3	9752347	9774947
CAMK1_chr3_9752347_9774947	0/0	g0026	3	0	1	2	0	0	CAMK1	chr3	9752347	9774947
CAMK1_chr3_9752347_9774947	0/0	g0027	3	3	0	0	0	0	CAMK1	chr3	9752347	9774947
CAMK1_chr3_9752347_9774947	0/0	g0028	3	3	0	0	0	0	CAMK1	chr3	9752347	9774947
CAMK1_chr3_9752347_9774947	0/0	g0029	3	3	0	0	0	0	CAMK1	chr3	9752347	9774947
CAMK1_chr3_9752347_9774947	0/0	g0030	2	2	0	0	0	0	CAMK1	chr3	9752347	9774947
CAMK1_chr3_9752347_9774947	0/0	g0031	2	2	0	0	0	0	CAMK1	chr3	9752347	9774947
CAMK1_chr3_9752347_9774947	0/0	g0032	2	2	0	0	0	0	CAMK1	chr3	9752347	9774947
CAMK1_chr3_9752347_9774947	0/0	g0033	2	0	0	1	0	1	CAMK1	chr3	9752347	9774947
CAMK1_chr3_9752347_9774947	0/0	g0034	2	0	0	2	0	0	CAMK1	chr3	9752347	9774947
CAMK1_chr3_9752347_9774947	0/0	g0035	2	0	0	2	0	0	CAMK1	chr3	9752347	9774947