JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
CAMKMT_chr2_44356947_44777592	0/0	g0189	1	0	1	0	0	0	CAMKMT	chr2	44356947	44777592
CAMKMT_chr2_44356947_44777592	0/0	g0190	1	0	0	1	0	0	CAMKMT	chr2	44356947	44777592
CAMKMT_chr2_44356947_44777592	0/0	g0191	1	0	0	1	0	0	CAMKMT	chr2	44356947	44777592
CAMKMT_chr2_44356947_44777592	0/0	g0192	1	0	0	1	0	0	CAMKMT	chr2	44356947	44777592
CAMKMT_chr2_44356947_44777592	0/0	g0193	1	0	0	1	0	0	CAMKMT	chr2	44356947	44777592
CAMKMT_chr2_44356947_44777592	0/0	g0194	1	0	0	1	0	0	CAMKMT	chr2	44356947	44777592
CAMKMT_chr2_44356947_44777592	0/0	g0195	1	0	0	1	0	0	CAMKMT	chr2	44356947	44777592
CAMKMT_chr2_44356947_44777592	0/0	g0196	1	0	0	1	0	0	CAMKMT	chr2	44356947	44777592
CAMKMT_chr2_44356947_44777592	0/0	g0197	1	0	0	1	0	0	CAMKMT	chr2	44356947	44777592
CAMKMT_chr2_44356947_44777592	0/0	g0198	1	1	0	0	0	0	CAMKMT	chr2	44356947	44777592
CAMKV_chr3_49852989_49874906	0/0	g0001	102	18	19	50	1	14	CAMKV	chr3	49852989	49874906
CAMKV_chr3_49852989_49874906	0/1	g0002	40	1	6	28	1	3	CAMKV	chr3	49852989	49874906
CAMKV_chr3_49852989_49874906	0/0	g0003	30	10	14	1	3	2	CAMKV	chr3	49852989	49874906
CAMKV_chr3_49852989_49874906	0/0	g0004	21	1	8	8	1	3	CAMKV	chr3	49852989	49874906
CAMKV_chr3_49852989_49874906	0/0	g0005	13	7	2	3	0	1	CAMKV	chr3	49852989	49874906
CAMKV_chr3_49852989_49874906	0/0	g0006	9	0	4	0	3	2	CAMKV	chr3	49852989	49874906
CAMKV_chr3_49852989_49874906	0/0	g0007	8	8	0	0	0	0	CAMKV	chr3	49852989	49874906
CAMKV_chr3_49852989_49874906	0/0	g0008	7	6	0	0	0	1	CAMKV	chr3	49852989	49874906
CAMKV_chr3_49852989_49874906	0/0	g0009	6	0	0	6	0	0	CAMKV	chr3	49852989	49874906
CAMKV_chr3_49852989_49874906	0/0	g0010	6	6	0	0	0	0	CAMKV	chr3	49852989	49874906
CAMKV_chr3_49852989_49874906	0/0	g0011	4	0	0	0	0	4	CAMKV	chr3	49852989	49874906
CAMKV_chr3_49852989_49874906	1/0	g0012	4	1	1	0	0	1	CAMKV	chr3	49852989	49874906
CAMKV_chr3_49852989_49874906	0/0	g0013	4	4	0	0	0	0	CAMKV	chr3	49852989	49874906
CAMKV_chr3_49852989_49874906	0/0	g0014	4	4	0	0	0	0	CAMKV	chr3	49852989	49874906
CAMKV_chr3_49852989_49874906	0/0	g0015	4	4	0	0	0	0	CAMKV	chr3	49852989	49874906
CAMKV_chr3_49852989_49874906	0/0	g0016	3	0	3	0	0	0	CAMKV	chr3	49852989	49874906
CAMKV_chr3_49852989_49874906	0/0	g0017	3	0	0	3	0	0	CAMKV	chr3	49852989	49874906
CAMKV_chr3_49852989_49874906	0/0	g0018	3	0	0	1	2	0	CAMKV	chr3	49852989	49874906
CAMKV_chr3_49852989_49874906	0/0	g0019	3	0	0	3	0	0	CAMKV	chr3	49852989	49874906
CAMKV_chr3_49852989_49874906	0/0	g0020	2	0	0	0	0	2	CAMKV	chr3	49852989	49874906
CAMKV_chr3_49852989_49874906	0/0	g0021	2	0	0	0	0	2	CAMKV	chr3	49852989	49874906
CAMKV_chr3_49852989_49874906	0/0	g0022	2	0	2	0	0	0	CAMKV	chr3	49852989	49874906
CAMKV_chr3_49852989_49874906	0/0	g0023	2	2	0	0	0	0	CAMKV	chr3	49852989	49874906
CAMKV_chr3_49852989_49874906	0/0	g0024	2	0	1	0	1	0	CAMKV	chr3	49852989	49874906
CAMKV_chr3_49852989_49874906	0/0	g0025	2	0	0	0	0	2	CAMKV	chr3	49852989	49874906
CAMKV_chr3_49852989_49874906	0/0	g0026	2	2	0	0	0	0	CAMKV	chr3	49852989	49874906
CAMKV_chr3_49852989_49874906	0/0	g0027	2	0	2	0	0	0	CAMKV	chr3	49852989	49874906
CAMKV_chr3_49852989_49874906	0/0	g0028	2	2	0	0	0	0	CAMKV	chr3	49852989	49874906
CAMKV_chr3_49852989_49874906	0/0	g0029	1	0	0	0	0	1	CAMKV	chr3	49852989	49874906
CAMKV_chr3_49852989_49874906	0/0	g0030	1	0	0	1	0	0	CAMKV	chr3	49852989	49874906
CAMKV_chr3_49852989_49874906	0/0	g0031	1	0	0	1	0	0	CAMKV	chr3	49852989	49874906
CAMKV_chr3_49852989_49874906	0/0	g0032	1	1	0	0	0	0	CAMKV	chr3	49852989	49874906
CAMKV_chr3_49852989_49874906	0/0	g0033	1	0	0	1	0	0	CAMKV	chr3	49852989	49874906
CAMKV_chr3_49852989_49874906	0/0	g0034	1	0	0	1	0	0	CAMKV	chr3	49852989	49874906
CAMKV_chr3_49852989_49874906	0/0	g0035	1	0	1	0	0	0	CAMKV	chr3	49852989	49874906
CAMKV_chr3_49852989_49874906	0/0	g0036	1	0	0	0	1	0	CAMKV	chr3	49852989	49874906
CAMKV_chr3_49852989_49874906	0/0	g0037	1	0	1	0	0	0	CAMKV	chr3	49852989	49874906
CAMKV_chr3_49852989_49874906	0/0	g0038	1	1	0	0	0	0	CAMKV	chr3	49852989	49874906
CAMKV_chr3_49852989_49874906	0/0	g0039	1	0	0	1	0	0	CAMKV	chr3	49852989	49874906
CAMKV_chr3_49852989_49874906	0/0	g0040	1	0	0	1	0	0	CAMKV	chr3	49852989	49874906