JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ACSM3_chr16_20759014_20802581	0/0	g0192	1	1	0	0	0	0	ACSM3	chr16	20759014	20802581
ACSM3_chr16_20759014_20802581	0/0	g0193	1	0	1	0	0	0	ACSM3	chr16	20759014	20802581
ACSM3_chr16_20759014_20802581	0/0	g0194	1	1	0	0	0	0	ACSM3	chr16	20759014	20802581
ACSM3_chr16_20759014_20802581	0/0	g0195	1	1	0	0	0	0	ACSM3	chr16	20759014	20802581
ACSM3_chr16_20759014_20802581	0/0	g0196	1	0	0	1	0	0	ACSM3	chr16	20759014	20802581
ACSM3_chr16_20759014_20802581	0/0	g0197	1	1	0	0	0	0	ACSM3	chr16	20759014	20802581
ACSM3_chr16_20759014_20802581	0/0	g0198	1	1	0	0	0	0	ACSM3	chr16	20759014	20802581
ACSM3_chr16_20759014_20802581	0/0	g0199	1	0	0	0	0	1	ACSM3	chr16	20759014	20802581
ACSM3_chr16_20759014_20802581	0/0	g0200	1	0	0	1	0	0	ACSM3	chr16	20759014	20802581
ACSM3_chr16_20759014_20802581	0/0	g0201	1	1	0	0	0	0	ACSM3	chr16	20759014	20802581
ACSM3_chr16_20759014_20802581	0/0	g0202	1	1	0	0	0	0	ACSM3	chr16	20759014	20802581
ACSM3_chr16_20759014_20802581	0/0	g0203	1	1	0	0	0	0	ACSM3	chr16	20759014	20802581
ACSM3_chr16_20759014_20802581	0/0	g0204	1	0	0	0	0	1	ACSM3	chr16	20759014	20802581
ACSM3_chr16_20759014_20802581	0/0	g0205	1	1	0	0	0	0	ACSM3	chr16	20759014	20802581
ACSM3_chr16_20759014_20802581	0/0	g0206	1	1	0	0	0	0	ACSM3	chr16	20759014	20802581
ACSM3_chr16_20759014_20802581	0/0	g0207	1	1	0	0	0	0	ACSM3	chr16	20759014	20802581
ACSM3_chr16_20759014_20802581	0/0	g0208	1	0	1	0	0	0	ACSM3	chr16	20759014	20802581
ACSM3_chr16_20759014_20802581	0/0	g0209	1	0	0	1	0	0	ACSM3	chr16	20759014	20802581
ACSM3_chr16_20759014_20802581	0/0	g0210	1	0	0	1	0	0	ACSM3	chr16	20759014	20802581
ACSM4_chr12_7299072_7333719	0/0	g0001	45	0	1	43	1	0	ACSM4	chr12	7299072	7333719
ACSM4_chr12_7299072_7333719	0/0	g0002	41	2	16	10	4	9	ACSM4	chr12	7299072	7333719
ACSM4_chr12_7299072_7333719	0/0	g0003	29	3	5	14	3	4	ACSM4	chr12	7299072	7333719
ACSM4_chr12_7299072_7333719	0/0	g0004	16	6	2	2	0	6	ACSM4	chr12	7299072	7333719
ACSM4_chr12_7299072_7333719	0/0	g0005	14	0	0	13	0	1	ACSM4	chr12	7299072	7333719
ACSM4_chr12_7299072_7333719	0/0	g0006	14	0	0	14	0	0	ACSM4	chr12	7299072	7333719
ACSM4_chr12_7299072_7333719	0/0	g0007	12	10	1	0	0	1	ACSM4	chr12	7299072	7333719
ACSM4_chr12_7299072_7333719	0/0	g0008	12	10	2	0	0	0	ACSM4	chr12	7299072	7333719
ACSM4_chr12_7299072_7333719	0/0	g0009	11	0	0	11	0	0	ACSM4	chr12	7299072	7333719
ACSM4_chr12_7299072_7333719	0/0	g0010	11	1	1	9	0	0	ACSM4	chr12	7299072	7333719
ACSM4_chr12_7299072_7333719	0/0	g0011	8	0	5	2	1	0	ACSM4	chr12	7299072	7333719
ACSM4_chr12_7299072_7333719	0/0	g0012	7	7	0	0	0	0	ACSM4	chr12	7299072	7333719
ACSM4_chr12_7299072_7333719	0/0	g0013	6	1	0	5	0	0	ACSM4	chr12	7299072	7333719
ACSM4_chr12_7299072_7333719	0/0	g0014	6	4	2	0	0	0	ACSM4	chr12	7299072	7333719
ACSM4_chr12_7299072_7333719	0/0	g0015	6	0	0	5	0	1	ACSM4	chr12	7299072	7333719
ACSM4_chr12_7299072_7333719	0/1	g0016	6	0	3	0	2	0	ACSM4	chr12	7299072	7333719
ACSM4_chr12_7299072_7333719	0/0	g0017	5	4	1	0	0	0	ACSM4	chr12	7299072	7333719
ACSM4_chr12_7299072_7333719	0/0	g0018	5	4	1	0	0	0	ACSM4	chr12	7299072	7333719
ACSM4_chr12_7299072_7333719	0/0	g0019	5	0	0	3	0	2	ACSM4	chr12	7299072	7333719
ACSM4_chr12_7299072_7333719	0/0	g0020	4	0	4	0	0	0	ACSM4	chr12	7299072	7333719
ACSM4_chr12_7299072_7333719	0/0	g0021	4	0	1	1	0	2	ACSM4	chr12	7299072	7333719
ACSM4_chr12_7299072_7333719	0/0	g0022	4	0	0	4	0	0	ACSM4	chr12	7299072	7333719
ACSM4_chr12_7299072_7333719	0/0	g0023	3	0	0	3	0	0	ACSM4	chr12	7299072	7333719
ACSM4_chr12_7299072_7333719	0/0	g0024	3	0	3	0	0	0	ACSM4	chr12	7299072	7333719
ACSM4_chr12_7299072_7333719	0/0	g0025	3	0	0	0	0	3	ACSM4	chr12	7299072	7333719
ACSM4_chr12_7299072_7333719	0/0	g0026	3	0	0	3	0	0	ACSM4	chr12	7299072	7333719
ACSM4_chr12_7299072_7333719	0/0	g0027	3	3	0	0	0	0	ACSM4	chr12	7299072	7333719
ACSM4_chr12_7299072_7333719	0/0	g0028	3	3	0	0	0	0	ACSM4	chr12	7299072	7333719
ACSM4_chr12_7299072_7333719	0/0	g0029	3	0	0	0	0	3	ACSM4	chr12	7299072	7333719
ACSM4_chr12_7299072_7333719	0/0	g0030	3	2	1	0	0	0	ACSM4	chr12	7299072	7333719
ACSM4_chr12_7299072_7333719	0/0	g0031	3	0	0	3	0	0	ACSM4	chr12	7299072	7333719