JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
CBLIF_chr11_59824273_59850499	0/0	g0241	1	1	0	0	0	0	CBLIF	chr11	59824273	59850499
CBLIF_chr11_59824273_59850499	0/0	g0242	1	0	1	0	0	0	CBLIF	chr11	59824273	59850499
CBLIF_chr11_59824273_59850499	0/0	g0243	1	1	0	0	0	0	CBLIF	chr11	59824273	59850499
CBLIF_chr11_59824273_59850499	0/0	g0244	1	1	0	0	0	0	CBLIF	chr11	59824273	59850499
CBLIF_chr11_59824273_59850499	0/0	g0245	1	0	0	1	0	0	CBLIF	chr11	59824273	59850499
CBLIF_chr11_59824273_59850499	0/0	g0246	1	1	0	0	0	0	CBLIF	chr11	59824273	59850499
CBLIF_chr11_59824273_59850499	0/0	g0247	1	1	0	0	0	0	CBLIF	chr11	59824273	59850499
CBLL1_chr7_107739142_107766667	0/0	g0001	125	8	25	74	8	10	CBLL1	chr7	107739142	107766667
CBLL1_chr7_107739142_107766667	0/0	g0002	90	2	17	59	3	9	CBLL1	chr7	107739142	107766667
CBLL1_chr7_107739142_107766667	1/1	g0003	27	7	11	0	3	4	CBLL1	chr7	107739142	107766667
CBLL1_chr7_107739142_107766667	0/0	g0004	13	0	0	13	0	0	CBLL1	chr7	107739142	107766667
CBLL1_chr7_107739142_107766667	0/0	g0005	9	9	0	0	0	0	CBLL1	chr7	107739142	107766667
CBLL1_chr7_107739142_107766667	0/0	g0006	8	1	5	1	0	1	CBLL1	chr7	107739142	107766667
CBLL1_chr7_107739142_107766667	0/0	g0007	8	8	0	0	0	0	CBLL1	chr7	107739142	107766667
CBLL1_chr7_107739142_107766667	0/0	g0008	6	6	0	0	0	0	CBLL1	chr7	107739142	107766667
CBLL1_chr7_107739142_107766667	0/0	g0009	6	2	1	3	0	0	CBLL1	chr7	107739142	107766667
CBLL1_chr7_107739142_107766667	0/0	g0010	5	5	0	0	0	0	CBLL1	chr7	107739142	107766667
CBLL1_chr7_107739142_107766667	0/0	g0011	4	0	0	4	0	0	CBLL1	chr7	107739142	107766667
CBLL1_chr7_107739142_107766667	0/0	g0012	4	4	0	0	0	0	CBLL1	chr7	107739142	107766667
CBLL1_chr7_107739142_107766667	0/0	g0013	4	0	3	0	1	0	CBLL1	chr7	107739142	107766667
CBLL1_chr7_107739142_107766667	0/0	g0014	3	0	0	3	0	0	CBLL1	chr7	107739142	107766667
CBLL1_chr7_107739142_107766667	0/0	g0015	3	0	3	0	0	0	CBLL1	chr7	107739142	107766667
CBLL1_chr7_107739142_107766667	0/0	g0016	3	0	0	3	0	0	CBLL1	chr7	107739142	107766667
CBLL1_chr7_107739142_107766667	0/0	g0017	3	3	0	0	0	0	CBLL1	chr7	107739142	107766667
CBLL1_chr7_107739142_107766667	0/0	g0018	3	3	0	0	0	0	CBLL1	chr7	107739142	107766667
CBLL1_chr7_107739142_107766667	0/0	g0019	3	0	0	3	0	0	CBLL1	chr7	107739142	107766667
CBLL1_chr7_107739142_107766667	0/0	g0020	3	0	0	3	0	0	CBLL1	chr7	107739142	107766667
CBLL1_chr7_107739142_107766667	0/0	g0021	3	3	0	0	0	0	CBLL1	chr7	107739142	107766667
CBLL1_chr7_107739142_107766667	0/0	g0022	3	3	0	0	0	0	CBLL1	chr7	107739142	107766667
CBLL1_chr7_107739142_107766667	0/0	g0023	3	3	0	0	0	0	CBLL1	chr7	107739142	107766667
CBLL1_chr7_107739142_107766667	0/0	g0024	2	2	0	0	0	0	CBLL1	chr7	107739142	107766667
CBLL1_chr7_107739142_107766667	0/0	g0025	2	0	0	1	0	1	CBLL1	chr7	107739142	107766667
CBLL1_chr7_107739142_107766667	0/0	g0026	2	0	2	0	0	0	CBLL1	chr7	107739142	107766667
CBLL1_chr7_107739142_107766667	0/0	g0027	2	0	0	1	0	1	CBLL1	chr7	107739142	107766667
CBLL1_chr7_107739142_107766667	0/0	g0028	2	0	0	0	0	2	CBLL1	chr7	107739142	107766667
CBLL1_chr7_107739142_107766667	0/0	g0029	2	1	1	0	0	0	CBLL1	chr7	107739142	107766667
CBLL1_chr7_107739142_107766667	0/0	g0030	2	2	0	0	0	0	CBLL1	chr7	107739142	107766667
CBLL1_chr7_107739142_107766667	0/0	g0031	2	1	1	0	0	0	CBLL1	chr7	107739142	107766667
CBLL1_chr7_107739142_107766667	0/0	g0032	2	1	1	0	0	0	CBLL1	chr7	107739142	107766667
CBLL1_chr7_107739142_107766667	0/0	g0033	2	0	0	2	0	0	CBLL1	chr7	107739142	107766667
CBLL1_chr7_107739142_107766667	0/0	g0034	2	2	0	0	0	0	CBLL1	chr7	107739142	107766667
CBLL1_chr7_107739142_107766667	0/0	g0035	2	0	0	1	0	1	CBLL1	chr7	107739142	107766667
CBLL1_chr7_107739142_107766667	0/0	g0036	2	0	0	0	0	2	CBLL1	chr7	107739142	107766667
CBLL1_chr7_107739142_107766667	0/0	g0037	2	2	0	0	0	0	CBLL1	chr7	107739142	107766667
CBLL1_chr7_107739142_107766667	0/0	g0038	1	1	0	0	0	0	CBLL1	chr7	107739142	107766667
CBLL1_chr7_107739142_107766667	0/0	g0039	1	0	0	1	0	0	CBLL1	chr7	107739142	107766667
CBLL1_chr7_107739142_107766667	0/0	g0040	1	0	0	0	1	0	CBLL1	chr7	107739142	107766667
CBLL1_chr7_107739142_107766667	0/0	g0041	1	1	0	0	0	0	CBLL1	chr7	107739142	107766667
CBLL1_chr7_107739142_107766667	0/0	g0042	1	1	0	0	0	0	CBLL1	chr7	107739142	107766667
CBLL1_chr7_107739142_107766667	0/0	g0043	1	1	0	0	0	0	CBLL1	chr7	107739142	107766667