JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
CCDC102B_chr18_68793080_69060189	0/0	g0206	1	0	0	1	0	0	CCDC102B	chr18	68793080	69060189
CCDC102B_chr18_68793080_69060189	0/0	g0207	1	0	0	1	0	0	CCDC102B	chr18	68793080	69060189
CCDC102B_chr18_68793080_69060189	0/0	g0208	1	0	0	1	0	0	CCDC102B	chr18	68793080	69060189
CCDC102B_chr18_68793080_69060189	0/0	g0209	1	0	0	1	0	0	CCDC102B	chr18	68793080	69060189
CCDC102B_chr18_68793080_69060189	0/0	g0210	1	0	0	1	0	0	CCDC102B	chr18	68793080	69060189
CCDC102B_chr18_68793080_69060189	0/0	g0211	1	0	0	0	0	1	CCDC102B	chr18	68793080	69060189
CCDC102B_chr18_68793080_69060189	0/0	g0212	1	0	0	1	0	0	CCDC102B	chr18	68793080	69060189
CCDC102B_chr18_68793080_69060189	0/0	g0213	1	0	0	1	0	0	CCDC102B	chr18	68793080	69060189
CCDC102B_chr18_68793080_69060189	0/0	g0214	1	0	0	1	0	0	CCDC102B	chr18	68793080	69060189
CCDC102B_chr18_68793080_69060189	0/0	g0215	1	1	0	0	0	0	CCDC102B	chr18	68793080	69060189
CCDC103_chr17_44894729_44910390	0/0	g0001	135	15	29	74	6	11	CCDC103	chr17	44894729	44910390
CCDC103_chr17_44894729_44910390	0/0	g0002	72	11	9	43	1	8	CCDC103	chr17	44894729	44910390
CCDC103_chr17_44894729_44910390	0/0	g0003	71	20	12	24	8	7	CCDC103	chr17	44894729	44910390
CCDC103_chr17_44894729_44910390	0/0	g0004	64	11	8	29	2	14	CCDC103	chr17	44894729	44910390
CCDC103_chr17_44894729_44910390	0/0	g0005	18	1	5	8	0	4	CCDC103	chr17	44894729	44910390
CCDC103_chr17_44894729_44910390	0/1	g0006	18	3	11	0	1	2	CCDC103	chr17	44894729	44910390
CCDC103_chr17_44894729_44910390	0/0	g0007	12	11	1	0	0	0	CCDC103	chr17	44894729	44910390
CCDC103_chr17_44894729_44910390	0/0	g0008	6	6	0	0	0	0	CCDC103	chr17	44894729	44910390
CCDC103_chr17_44894729_44910390	0/0	g0009	5	5	0	0	0	0	CCDC103	chr17	44894729	44910390
CCDC103_chr17_44894729_44910390	0/0	g0010	4	0	0	4	0	0	CCDC103	chr17	44894729	44910390
CCDC103_chr17_44894729_44910390	1/0	g0011	3	0	0	2	0	0	CCDC103	chr17	44894729	44910390
CCDC103_chr17_44894729_44910390	0/0	g0012	2	2	0	0	0	0	CCDC103	chr17	44894729	44910390
CCDC103_chr17_44894729_44910390	0/0	g0013	2	2	0	0	0	0	CCDC103	chr17	44894729	44910390
CCDC103_chr17_44894729_44910390	0/0	g0014	2	2	0	0	0	0	CCDC103	chr17	44894729	44910390
CCDC103_chr17_44894729_44910390	0/0	g0015	1	1	0	0	0	0	CCDC103	chr17	44894729	44910390
CCDC103_chr17_44894729_44910390	0/0	g0016	1	1	0	0	0	0	CCDC103	chr17	44894729	44910390
CCDC103_chr17_44894729_44910390	0/0	g0017	1	0	0	1	0	0	CCDC103	chr17	44894729	44910390
CCDC103_chr17_44894729_44910390	0/0	g0018	1	1	0	0	0	0	CCDC103	chr17	44894729	44910390
CCDC103_chr17_44894729_44910390	0/0	g0019	1	1	0	0	0	0	CCDC103	chr17	44894729	44910390
CCDC103_chr17_44894729_44910390	0/0	g0020	1	1	0	0	0	0	CCDC103	chr17	44894729	44910390
CCDC103_chr17_44894729_44910390	0/0	g0021	1	1	0	0	0	0	CCDC103	chr17	44894729	44910390
CCDC103_chr17_44894729_44910390	0/0	g0022	1	1	0	0	0	0	CCDC103	chr17	44894729	44910390
CCDC103_chr17_44894729_44910390	0/0	g0023	1	0	1	0	0	0	CCDC103	chr17	44894729	44910390
CCDC103_chr17_44894729_44910390	0/0	g0024	1	1	0	0	0	0	CCDC103	chr17	44894729	44910390
CCDC103_chr17_44894729_44910390	0/0	g0025	1	1	0	0	0	0	CCDC103	chr17	44894729	44910390
CCDC103_chr17_44894729_44910390	0/0	g0026	1	0	0	1	0	0	CCDC103	chr17	44894729	44910390
CCDC105_chr19_15005726_15028276	0/0	g0001	20	0	6	14	0	0	CCDC105	chr19	15005726	15028276
CCDC105_chr19_15005726_15028276	0/0	g0002	8	0	0	7	0	1	CCDC105	chr19	15005726	15028276
CCDC105_chr19_15005726_15028276	0/0	g0003	7	2	1	0	1	3	CCDC105	chr19	15005726	15028276
CCDC105_chr19_15005726_15028276	0/0	g0004	7	0	2	3	0	2	CCDC105	chr19	15005726	15028276
CCDC105_chr19_15005726_15028276	0/0	g0005	4	0	1	3	0	0	CCDC105	chr19	15005726	15028276
CCDC105_chr19_15005726_15028276	0/0	g0006	4	1	1	0	0	2	CCDC105	chr19	15005726	15028276
CCDC105_chr19_15005726_15028276	0/0	g0007	4	0	1	2	1	0	CCDC105	chr19	15005726	15028276
CCDC105_chr19_15005726_15028276	0/0	g0008	3	0	0	3	0	0	CCDC105	chr19	15005726	15028276
CCDC105_chr19_15005726_15028276	0/0	g0009	3	0	1	2	0	0	CCDC105	chr19	15005726	15028276
CCDC105_chr19_15005726_15028276	0/0	g0010	3	0	1	2	0	0	CCDC105	chr19	15005726	15028276
CCDC105_chr19_15005726_15028276	0/1	g0011	3	0	0	2	0	0	CCDC105	chr19	15005726	15028276
CCDC105_chr19_15005726_15028276	0/0	g0012	3	0	0	3	0	0	CCDC105	chr19	15005726	15028276
CCDC105_chr19_15005726_15028276	0/0	g0013	3	0	0	3	0	0	CCDC105	chr19	15005726	15028276
CCDC105_chr19_15005726_15028276	0/0	g0014	2	0	0	2	0	0	CCDC105	chr19	15005726	15028276