JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
CCDC136_chr7_128786968_128827130	0/0	g0185	1	0	0	1	0	0	CCDC136	chr7	128786968	128827130
CCDC136_chr7_128786968_128827130	0/0	g0186	1	0	0	1	0	0	CCDC136	chr7	128786968	128827130
CCDC136_chr7_128786968_128827130	0/0	g0187	1	0	1	0	0	0	CCDC136	chr7	128786968	128827130
CCDC136_chr7_128786968_128827130	0/0	g0188	1	0	0	1	0	0	CCDC136	chr7	128786968	128827130
CCDC136_chr7_128786968_128827130	0/0	g0189	1	0	0	1	0	0	CCDC136	chr7	128786968	128827130
CCDC136_chr7_128786968_128827130	0/0	g0190	1	1	0	0	0	0	CCDC136	chr7	128786968	128827130
CCDC136_chr7_128786968_128827130	0/0	g0191	1	0	0	1	0	0	CCDC136	chr7	128786968	128827130
CCDC136_chr7_128786968_128827130	0/0	g0192	1	0	0	1	0	0	CCDC136	chr7	128786968	128827130
CCDC136_chr7_128786968_128827130	0/0	g0193	1	0	0	1	0	0	CCDC136	chr7	128786968	128827130
CCDC136_chr7_128786968_128827130	0/0	g0194	1	0	0	1	0	0	CCDC136	chr7	128786968	128827130
CCDC136_chr7_128786968_128827130	0/0	g0195	1	0	0	1	0	0	CCDC136	chr7	128786968	128827130
CCDC136_chr7_128786968_128827130	0/0	g0196	1	0	0	1	0	0	CCDC136	chr7	128786968	128827130
CCDC136_chr7_128786968_128827130	0/0	g0197	1	0	0	1	0	0	CCDC136	chr7	128786968	128827130
CCDC136_chr7_128786968_128827130	0/0	g0198	1	0	0	1	0	0	CCDC136	chr7	128786968	128827130
CCDC136_chr7_128786968_128827130	0/0	g0199	1	0	0	1	0	0	CCDC136	chr7	128786968	128827130
CCDC136_chr7_128786968_128827130	0/0	g0200	1	0	0	1	0	0	CCDC136	chr7	128786968	128827130
CCDC136_chr7_128786968_128827130	0/0	g0201	1	0	0	1	0	0	CCDC136	chr7	128786968	128827130
CCDC136_chr7_128786968_128827130	0/0	g0202	1	0	1	0	0	0	CCDC136	chr7	128786968	128827130
CCDC136_chr7_128786968_128827130	0/0	g0203	1	0	0	0	1	0	CCDC136	chr7	128786968	128827130
CCDC136_chr7_128786968_128827130	0/0	g0204	1	0	0	0	1	0	CCDC136	chr7	128786968	128827130
CCDC136_chr7_128786968_128827130	0/0	g0205	1	0	0	0	0	1	CCDC136	chr7	128786968	128827130
CCDC136_chr7_128786968_128827130	0/0	g0206	1	1	0	0	0	0	CCDC136	chr7	128786968	128827130
CCDC136_chr7_128786968_128827130	0/0	g0207	1	1	0	0	0	0	CCDC136	chr7	128786968	128827130
CCDC136_chr7_128786968_128827130	0/0	g0208	1	0	0	1	0	0	CCDC136	chr7	128786968	128827130
CCDC136_chr7_128786968_128827130	0/0	g0209	1	0	0	1	0	0	CCDC136	chr7	128786968	128827130
CCDC136_chr7_128786968_128827130	0/0	g0210	1	0	0	1	0	0	CCDC136	chr7	128786968	128827130
CCDC136_chr7_128786968_128827130	0/0	g0211	1	0	0	1	0	0	CCDC136	chr7	128786968	128827130
CCDC136_chr7_128786968_128827130	0/0	g0212	1	0	0	1	0	0	CCDC136	chr7	128786968	128827130
CCDC136_chr7_128786968_128827130	0/0	g0213	1	0	0	1	0	0	CCDC136	chr7	128786968	128827130
CCDC136_chr7_128786968_128827130	0/0	g0214	1	0	0	1	0	0	CCDC136	chr7	128786968	128827130
CCDC136_chr7_128786968_128827130	0/0	g0215	1	0	1	0	0	0	CCDC136	chr7	128786968	128827130
CCDC136_chr7_128786968_128827130	0/0	g0216	1	0	0	1	0	0	CCDC136	chr7	128786968	128827130
CCDC137_chr17_81661737_81678899	1/0	g0001	222	37	56	92	11	25	CCDC137	chr17	81661737	81678899
CCDC137_chr17_81661737_81678899	0/0	g0002	33	8	2	19	2	2	CCDC137	chr17	81661737	81678899
CCDC137_chr17_81661737_81678899	0/0	g0003	16	14	1	0	0	1	CCDC137	chr17	81661737	81678899
CCDC137_chr17_81661737_81678899	0/0	g0004	16	1	1	13	0	1	CCDC137	chr17	81661737	81678899
CCDC137_chr17_81661737_81678899	0/0	g0005	12	0	4	0	3	5	CCDC137	chr17	81661737	81678899
CCDC137_chr17_81661737_81678899	0/0	g0006	10	0	0	10	0	0	CCDC137	chr17	81661737	81678899
CCDC137_chr17_81661737_81678899	0/0	g0007	7	1	1	3	0	2	CCDC137	chr17	81661737	81678899
CCDC137_chr17_81661737_81678899	0/0	g0008	5	4	1	0	0	0	CCDC137	chr17	81661737	81678899
CCDC137_chr17_81661737_81678899	0/0	g0009	5	0	1	2	0	2	CCDC137	chr17	81661737	81678899
CCDC137_chr17_81661737_81678899	0/0	g0010	4	0	0	4	0	0	CCDC137	chr17	81661737	81678899
CCDC137_chr17_81661737_81678899	0/0	g0011	3	2	0	1	0	0	CCDC137	chr17	81661737	81678899
CCDC137_chr17_81661737_81678899	0/0	g0012	3	0	0	3	0	0	CCDC137	chr17	81661737	81678899
CCDC137_chr17_81661737_81678899	0/0	g0013	3	0	0	3	0	0	CCDC137	chr17	81661737	81678899
CCDC137_chr17_81661737_81678899	0/0	g0014	3	0	0	3	0	0	CCDC137	chr17	81661737	81678899
CCDC137_chr17_81661737_81678899	0/0	g0015	3	3	0	0	0	0	CCDC137	chr17	81661737	81678899
CCDC137_chr17_81661737_81678899	0/0	g0016	2	2	0	0	0	0	CCDC137	chr17	81661737	81678899
CCDC137_chr17_81661737_81678899	0/0	g0017	2	2	0	0	0	0	CCDC137	chr17	81661737	81678899
CCDC137_chr17_81661737_81678899	0/0	g0018	2	2	0	0	0	0	CCDC137	chr17	81661737	81678899