JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
CCDC141_chr2_178824757_179055137	0/0	g0238	1	1	0	0	0	0	CCDC141	chr2	178824757	179055137
CCDC141_chr2_178824757_179055137	0/0	g0239	1	0	0	0	0	1	CCDC141	chr2	178824757	179055137
CCDC141_chr2_178824757_179055137	0/0	g0240	1	0	1	0	0	0	CCDC141	chr2	178824757	179055137
CCDC141_chr2_178824757_179055137	0/0	g0241	1	0	0	0	0	1	CCDC141	chr2	178824757	179055137
CCDC141_chr2_178824757_179055137	0/0	g0242	1	0	0	0	0	1	CCDC141	chr2	178824757	179055137
CCDC141_chr2_178824757_179055137	0/0	g0243	1	0	1	0	0	0	CCDC141	chr2	178824757	179055137
CCDC141_chr2_178824757_179055137	0/0	g0244	1	0	0	1	0	0	CCDC141	chr2	178824757	179055137
CCDC141_chr2_178824757_179055137	0/0	g0245	1	0	0	1	0	0	CCDC141	chr2	178824757	179055137
CCDC141_chr2_178824757_179055137	0/0	g0246	1	0	0	1	0	0	CCDC141	chr2	178824757	179055137
CCDC141_chr2_178824757_179055137	0/0	g0247	1	0	0	0	0	1	CCDC141	chr2	178824757	179055137
CCDC141_chr2_178824757_179055137	0/0	g0248	1	0	0	0	0	1	CCDC141	chr2	178824757	179055137
CCDC141_chr2_178824757_179055137	0/0	g0249	1	0	0	1	0	0	CCDC141	chr2	178824757	179055137
CCDC141_chr2_178824757_179055137	0/0	g0250	1	0	1	0	0	0	CCDC141	chr2	178824757	179055137
CCDC141_chr2_178824757_179055137	0/0	g0251	1	0	1	0	0	0	CCDC141	chr2	178824757	179055137
CCDC141_chr2_178824757_179055137	0/0	g0252	1	0	0	1	0	0	CCDC141	chr2	178824757	179055137
CCDC141_chr2_178824757_179055137	0/0	g0253	1	0	0	0	0	1	CCDC141	chr2	178824757	179055137
CCDC141_chr2_178824757_179055137	0/0	g0254	1	0	1	0	0	0	CCDC141	chr2	178824757	179055137
CCDC141_chr2_178824757_179055137	0/0	g0255	1	0	1	0	0	0	CCDC141	chr2	178824757	179055137
CCDC141_chr2_178824757_179055137	0/0	g0256	1	0	1	0	0	0	CCDC141	chr2	178824757	179055137
CCDC141_chr2_178824757_179055137	0/0	g0257	1	0	1	0	0	0	CCDC141	chr2	178824757	179055137
CCDC141_chr2_178824757_179055137	0/0	g0258	1	0	1	0	0	0	CCDC141	chr2	178824757	179055137
CCDC141_chr2_178824757_179055137	0/0	g0259	1	0	0	1	0	0	CCDC141	chr2	178824757	179055137
CCDC141_chr2_178824757_179055137	0/0	g0260	1	0	0	1	0	0	CCDC141	chr2	178824757	179055137
CCDC141_chr2_178824757_179055137	0/0	g0261	1	0	0	1	0	0	CCDC141	chr2	178824757	179055137
CCDC141_chr2_178824757_179055137	0/0	g0262	1	0	1	0	0	0	CCDC141	chr2	178824757	179055137
CCDC141_chr2_178824757_179055137	0/0	g0263	1	0	1	0	0	0	CCDC141	chr2	178824757	179055137
CCDC141_chr2_178824757_179055137	0/0	g0264	1	0	0	0	0	1	CCDC141	chr2	178824757	179055137
CCDC141_chr2_178824757_179055137	0/0	g0265	1	0	0	1	0	0	CCDC141	chr2	178824757	179055137
CCDC141_chr2_178824757_179055137	0/0	g0266	1	1	0	0	0	0	CCDC141	chr2	178824757	179055137
CCDC141_chr2_178824757_179055137	0/0	g0267	1	0	0	0	0	1	CCDC141	chr2	178824757	179055137
CCDC141_chr2_178824757_179055137	0/0	g0268	1	0	1	0	0	0	CCDC141	chr2	178824757	179055137
CCDC141_chr2_178824757_179055137	0/0	g0269	1	0	1	0	0	0	CCDC141	chr2	178824757	179055137
CCDC141_chr2_178824757_179055137	0/0	g0270	1	0	0	0	0	1	CCDC141	chr2	178824757	179055137
CCDC141_chr2_178824757_179055137	0/0	g0271	1	0	0	1	0	0	CCDC141	chr2	178824757	179055137
CCDC141_chr2_178824757_179055137	0/0	g0272	1	0	0	1	0	0	CCDC141	chr2	178824757	179055137
CCDC141_chr2_178824757_179055137	0/0	g0273	1	0	1	0	0	0	CCDC141	chr2	178824757	179055137
CCDC142_chr2_74467832_74487998	0/0	g0001	26	1	6	17	0	2	CCDC142	chr2	74467832	74487998
CCDC142_chr2_74467832_74487998	0/0	g0002	16	0	3	13	0	0	CCDC142	chr2	74467832	74487998
CCDC142_chr2_74467832_74487998	0/0	g0003	8	2	3	1	1	1	CCDC142	chr2	74467832	74487998
CCDC142_chr2_74467832_74487998	0/0	g0004	7	1	0	6	0	0	CCDC142	chr2	74467832	74487998
CCDC142_chr2_74467832_74487998	0/0	g0005	7	0	2	2	3	0	CCDC142	chr2	74467832	74487998
CCDC142_chr2_74467832_74487998	0/0	g0006	6	0	2	4	0	0	CCDC142	chr2	74467832	74487998
CCDC142_chr2_74467832_74487998	0/0	g0007	6	0	0	6	0	0	CCDC142	chr2	74467832	74487998
CCDC142_chr2_74467832_74487998	0/0	g0008	6	1	4	0	1	0	CCDC142	chr2	74467832	74487998
CCDC142_chr2_74467832_74487998	0/0	g0009	5	0	1	4	0	0	CCDC142	chr2	74467832	74487998
CCDC142_chr2_74467832_74487998	0/0	g0010	5	0	2	1	1	1	CCDC142	chr2	74467832	74487998
CCDC142_chr2_74467832_74487998	0/0	g0011	5	3	2	0	0	0	CCDC142	chr2	74467832	74487998
CCDC142_chr2_74467832_74487998	0/0	g0012	4	4	0	0	0	0	CCDC142	chr2	74467832	74487998
CCDC142_chr2_74467832_74487998	0/0	g0013	4	0	0	4	0	0	CCDC142	chr2	74467832	74487998
CCDC142_chr2_74467832_74487998	0/0	g0014	4	0	0	3	0	1	CCDC142	chr2	74467832	74487998