JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
CCDC150_chr2_196634715_196737801	0/0	g0169	1	0	0	1	0	0	CCDC150	chr2	196634715	196737801
CCDC150_chr2_196634715_196737801	0/0	g0170	1	0	0	1	0	0	CCDC150	chr2	196634715	196737801
CCDC150_chr2_196634715_196737801	0/0	g0171	1	0	1	0	0	0	CCDC150	chr2	196634715	196737801
CCDC150_chr2_196634715_196737801	0/0	g0172	1	0	1	0	0	0	CCDC150	chr2	196634715	196737801
CCDC150_chr2_196634715_196737801	0/0	g0173	1	0	1	0	0	0	CCDC150	chr2	196634715	196737801
CCDC150_chr2_196634715_196737801	0/0	g0174	1	0	0	1	0	0	CCDC150	chr2	196634715	196737801
CCDC150_chr2_196634715_196737801	0/0	g0175	1	0	0	1	0	0	CCDC150	chr2	196634715	196737801
CCDC150_chr2_196634715_196737801	0/0	g0176	1	0	0	1	0	0	CCDC150	chr2	196634715	196737801
CCDC150_chr2_196634715_196737801	0/0	g0177	1	0	1	0	0	0	CCDC150	chr2	196634715	196737801
CCDC150_chr2_196634715_196737801	0/0	g0178	1	0	1	0	0	0	CCDC150	chr2	196634715	196737801
CCDC150_chr2_196634715_196737801	0/0	g0179	1	0	0	0	0	1	CCDC150	chr2	196634715	196737801
CCDC150_chr2_196634715_196737801	0/0	g0180	1	0	1	0	0	0	CCDC150	chr2	196634715	196737801
CCDC150_chr2_196634715_196737801	0/0	g0181	1	0	1	0	0	0	CCDC150	chr2	196634715	196737801
CCDC150_chr2_196634715_196737801	0/0	g0182	1	0	1	0	0	0	CCDC150	chr2	196634715	196737801
CCDC150_chr2_196634715_196737801	0/0	g0183	1	0	1	0	0	0	CCDC150	chr2	196634715	196737801
CCDC150_chr2_196634715_196737801	0/0	g0184	1	1	0	0	0	0	CCDC150	chr2	196634715	196737801
CCDC150_chr2_196634715_196737801	0/0	g0185	1	1	0	0	0	0	CCDC150	chr2	196634715	196737801
CCDC150_chr2_196634715_196737801	0/0	g0186	1	0	0	0	0	1	CCDC150	chr2	196634715	196737801
CCDC150_chr2_196634715_196737801	0/0	g0187	1	0	0	0	1	0	CCDC150	chr2	196634715	196737801
CCDC150_chr2_196634715_196737801	0/0	g0188	1	0	0	0	0	1	CCDC150	chr2	196634715	196737801
CCDC150_chr2_196634715_196737801	0/0	g0189	1	0	1	0	0	0	CCDC150	chr2	196634715	196737801
CCDC150_chr2_196634715_196737801	0/0	g0190	1	0	1	0	0	0	CCDC150	chr2	196634715	196737801
CCDC150_chr2_196634715_196737801	0/0	g0191	1	0	0	1	0	0	CCDC150	chr2	196634715	196737801
CCDC150_chr2_196634715_196737801	0/0	g0192	1	1	0	0	0	0	CCDC150	chr2	196634715	196737801
CCDC150_chr2_196634715_196737801	0/0	g0193	1	0	0	1	0	0	CCDC150	chr2	196634715	196737801
CCDC150_chr2_196634715_196737801	0/0	g0194	1	0	0	1	0	0	CCDC150	chr2	196634715	196737801
CCDC150_chr2_196634715_196737801	0/0	g0195	1	0	1	0	0	0	CCDC150	chr2	196634715	196737801
CCDC150_chr2_196634715_196737801	0/0	g0196	1	0	0	0	0	1	CCDC150	chr2	196634715	196737801
CCDC152_chr5_42751818_42807439	0/0	g0001	22	0	1	20	0	1	CCDC152	chr5	42751818	42807439
CCDC152_chr5_42751818_42807439	0/0	g0002	22	1	3	16	0	2	CCDC152	chr5	42751818	42807439
CCDC152_chr5_42751818_42807439	0/0	g0003	10	0	0	10	0	0	CCDC152	chr5	42751818	42807439
CCDC152_chr5_42751818_42807439	0/0	g0004	10	0	1	7	1	1	CCDC152	chr5	42751818	42807439
CCDC152_chr5_42751818_42807439	0/1	g0005	9	0	5	0	1	2	CCDC152	chr5	42751818	42807439
CCDC152_chr5_42751818_42807439	0/0	g0006	6	5	1	0	0	0	CCDC152	chr5	42751818	42807439
CCDC152_chr5_42751818_42807439	0/0	g0007	6	6	0	0	0	0	CCDC152	chr5	42751818	42807439
CCDC152_chr5_42751818_42807439	0/0	g0008	5	1	2	0	1	1	CCDC152	chr5	42751818	42807439
CCDC152_chr5_42751818_42807439	0/0	g0009	5	0	3	0	2	0	CCDC152	chr5	42751818	42807439
CCDC152_chr5_42751818_42807439	0/0	g0010	4	0	0	0	2	2	CCDC152	chr5	42751818	42807439
CCDC152_chr5_42751818_42807439	0/0	g0011	4	4	0	0	0	0	CCDC152	chr5	42751818	42807439
CCDC152_chr5_42751818_42807439	0/0	g0012	4	0	0	4	0	0	CCDC152	chr5	42751818	42807439
CCDC152_chr5_42751818_42807439	0/0	g0013	3	3	0	0	0	0	CCDC152	chr5	42751818	42807439
CCDC152_chr5_42751818_42807439	0/0	g0014	3	3	0	0	0	0	CCDC152	chr5	42751818	42807439
CCDC152_chr5_42751818_42807439	0/0	g0015	3	0	3	0	0	0	CCDC152	chr5	42751818	42807439
CCDC152_chr5_42751818_42807439	0/0	g0016	3	3	0	0	0	0	CCDC152	chr5	42751818	42807439
CCDC152_chr5_42751818_42807439	0/0	g0017	3	0	0	3	0	0	CCDC152	chr5	42751818	42807439
CCDC152_chr5_42751818_42807439	0/0	g0018	3	0	0	3	0	0	CCDC152	chr5	42751818	42807439
CCDC152_chr5_42751818_42807439	0/0	g0019	3	2	1	0	0	0	CCDC152	chr5	42751818	42807439
CCDC152_chr5_42751818_42807439	0/0	g0020	2	2	0	0	0	0	CCDC152	chr5	42751818	42807439
CCDC152_chr5_42751818_42807439	0/0	g0021	2	2	0	0	0	0	CCDC152	chr5	42751818	42807439
CCDC152_chr5_42751818_42807439	0/0	g0022	2	0	0	0	0	2	CCDC152	chr5	42751818	42807439