JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
CCL25_chr19_8047760_8067650	0/0	g0214	1	1	0	0	0	0	CCL25	chr19	8047760	8067650
CCL25_chr19_8047760_8067650	0/0	g0215	1	0	0	0	1	0	CCL25	chr19	8047760	8067650
CCL25_chr19_8047760_8067650	0/0	g0216	1	0	0	1	0	0	CCL25	chr19	8047760	8067650
CCL25_chr19_8047760_8067650	0/0	g0217	1	0	0	1	0	0	CCL25	chr19	8047760	8067650
CCL25_chr19_8047760_8067650	0/0	g0218	1	1	0	0	0	0	CCL25	chr19	8047760	8067650
CCL25_chr19_8047760_8067650	0/0	g0219	1	0	0	0	1	0	CCL25	chr19	8047760	8067650
CCL25_chr19_8047760_8067650	0/0	g0220	1	0	1	0	0	0	CCL25	chr19	8047760	8067650
CCL25_chr19_8047760_8067650	0/0	g0221	1	0	1	0	0	0	CCL25	chr19	8047760	8067650
CCL25_chr19_8047760_8067650	0/0	g0222	1	0	1	0	0	0	CCL25	chr19	8047760	8067650
CCL25_chr19_8047760_8067650	0/0	g0223	1	0	0	0	0	1	CCL25	chr19	8047760	8067650
CCL25_chr19_8047760_8067650	0/0	g0224	1	1	0	0	0	0	CCL25	chr19	8047760	8067650
CCL25_chr19_8047760_8067650	0/0	g0225	1	1	0	0	0	0	CCL25	chr19	8047760	8067650
CCL25_chr19_8047760_8067650	0/0	g0226	1	0	0	0	0	1	CCL25	chr19	8047760	8067650
CCL25_chr19_8047760_8067650	0/0	g0227	1	0	1	0	0	0	CCL25	chr19	8047760	8067650
CCL25_chr19_8047760_8067650	0/0	g0228	1	0	0	0	1	0	CCL25	chr19	8047760	8067650
CCL25_chr19_8047760_8067650	0/0	g0229	1	1	0	0	0	0	CCL25	chr19	8047760	8067650
CCL25_chr19_8047760_8067650	0/0	g0230	1	0	1	0	0	0	CCL25	chr19	8047760	8067650
CCL25_chr19_8047760_8067650	0/0	g0231	1	0	0	0	1	0	CCL25	chr19	8047760	8067650
CCL25_chr19_8047760_8067650	0/0	g0232	1	0	1	0	0	0	CCL25	chr19	8047760	8067650
CCL26_chr7_75764538_75777211	1/0	g0001	96	12	18	51	4	10	CCL26	chr7	75764538	75777211
CCL26_chr7_75764538_75777211	0/0	g0002	88	32	15	23	5	13	CCL26	chr7	75764538	75777211
CCL26_chr7_75764538_75777211	0/0	g0003	87	12	17	47	1	10	CCL26	chr7	75764538	75777211
CCL26_chr7_75764538_75777211	0/1	g0004	47	2	5	31	3	5	CCL26	chr7	75764538	75777211
CCL26_chr7_75764538_75777211	0/0	g0005	18	7	0	9	0	2	CCL26	chr7	75764538	75777211
CCL26_chr7_75764538_75777211	0/0	g0006	12	0	0	11	0	1	CCL26	chr7	75764538	75777211
CCL26_chr7_75764538_75777211	0/0	g0007	8	0	0	8	0	0	CCL26	chr7	75764538	75777211
CCL26_chr7_75764538_75777211	0/0	g0008	7	0	0	7	0	0	CCL26	chr7	75764538	75777211
CCL26_chr7_75764538_75777211	0/0	g0009	5	0	2	0	2	1	CCL26	chr7	75764538	75777211
CCL26_chr7_75764538_75777211	0/0	g0010	5	5	0	0	0	0	CCL26	chr7	75764538	75777211
CCL26_chr7_75764538_75777211	0/0	g0011	4	0	1	1	1	1	CCL26	chr7	75764538	75777211
CCL26_chr7_75764538_75777211	0/0	g0012	4	4	0	0	0	0	CCL26	chr7	75764538	75777211
CCL26_chr7_75764538_75777211	0/0	g0013	3	0	1	0	2	0	CCL26	chr7	75764538	75777211
CCL26_chr7_75764538_75777211	0/0	g0014	3	2	1	0	0	0	CCL26	chr7	75764538	75777211
CCL26_chr7_75764538_75777211	0/0	g0015	3	2	1	0	0	0	CCL26	chr7	75764538	75777211
CCL26_chr7_75764538_75777211	0/0	g0016	3	2	1	0	0	0	CCL26	chr7	75764538	75777211
CCL26_chr7_75764538_75777211	0/0	g0017	3	0	2	1	0	0	CCL26	chr7	75764538	75777211
CCL26_chr7_75764538_75777211	0/0	g0018	2	0	0	2	0	0	CCL26	chr7	75764538	75777211
CCL26_chr7_75764538_75777211	0/0	g0019	2	2	0	0	0	0	CCL26	chr7	75764538	75777211
CCL26_chr7_75764538_75777211	0/0	g0020	2	2	0	0	0	0	CCL26	chr7	75764538	75777211
CCL26_chr7_75764538_75777211	0/0	g0021	2	1	0	1	0	0	CCL26	chr7	75764538	75777211
CCL26_chr7_75764538_75777211	0/0	g0022	2	0	0	0	0	2	CCL26	chr7	75764538	75777211
CCL26_chr7_75764538_75777211	0/0	g0023	1	0	0	0	0	1	CCL26	chr7	75764538	75777211
CCL26_chr7_75764538_75777211	0/0	g0024	1	0	1	0	0	0	CCL26	chr7	75764538	75777211
CCL26_chr7_75764538_75777211	0/0	g0025	1	1	0	0	0	0	CCL26	chr7	75764538	75777211
CCL26_chr7_75764538_75777211	0/0	g0026	1	0	0	0	0	1	CCL26	chr7	75764538	75777211
CCL26_chr7_75764538_75777211	0/0	g0027	1	0	0	1	0	0	CCL26	chr7	75764538	75777211
CCL26_chr7_75764538_75777211	0/0	g0028	1	0	0	0	0	1	CCL26	chr7	75764538	75777211
CCL26_chr7_75764538_75777211	0/0	g0029	1	1	0	0	0	0	CCL26	chr7	75764538	75777211
CCL26_chr7_75764538_75777211	0/0	g0030	1	0	0	1	0	0	CCL26	chr7	75764538	75777211
CCL26_chr7_75764538_75777211	0/0	g0031	1	1	0	0	0	0	CCL26	chr7	75764538	75777211