Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	SAS	tseq	genename	chr	start	end
ACVR2B_chr3_38448890_38498142	0/0	t0163	10217	1	1	0	0	0	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0164	10221	1	1	0	0	0	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0165	10219	1	1	0	0	0	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0166	10239	1	0	0	1	0	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0167	10241	1	1	0	0	0	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0168	10232	1	0	0	0	1	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0169	10236	1	0	0	1	0	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0170	10221	1	0	1	0	0	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0171	10220	1	0	0	1	0	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0172	10215	1	1	0	0	0	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0173	10214	1	1	0	0	0	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0174	10224	1	1	0	0	0	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0175	10226	1	1	0	0	0	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0176	10220	1	1	0	0	0	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0177	10225	1	1	0	0	0	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0178	10218	1	0	1	0	0	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0179	10211	1	1	0	0	0	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0180	10215	1	0	0	1	0	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0181	10227	1	1	0	0	0	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0182	10219	1	0	0	1	0	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0183	10227	1	0	0	1	0	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0184	10217	1	0	0	1	0	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0185	10215	1	0	0	1	0	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0186	10213	1	0	0	1	0	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0187	10216	1	0	1	0	0	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0188	10221	1	0	0	1	0	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0189	10217	1	0	0	1	0	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0190	10230	1	1	0	0	0	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0191	10228	1	1	0	0	0	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0192	10226	1	1	0	0	0	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0193	10222	1	1	0	0	0	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0194	10220	1	1	0	0	0	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0195	10227	1	1	0	0	0	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0196	10220	1	1	0	0	0	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0197	10212	1	1	0	0	0	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0198	10208	1	1	0	0	0	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0199	10201	1	1	0	0	0	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0200	10195	1	1	0	0	0	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0201	10238	1	0	0	1	0	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0202	10232	1	0	0	1	0	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0203	10225	1	0	0	1	0	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0204	10230	1	0	0	0	1	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0205	10228	1	0	0	1	0	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0206	10222	1	0	0	1	0	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0207	10229	1	0	0	1	0	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0208	10223	1	0	0	1	0	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0209	10228	1	0	0	1	0	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0210	10244	1	0	0	1	0	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0211	10240	1	0	0	1	0	copy fasta	ACVR2B	chr3	38448890	38498142
ACVR2B_chr3_38448890_38498142	0/0	t0212	10234	1	0	0	1	0	copy fasta	ACVR2B	chr3	38448890	38498142