Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
ADAM10_chr15_58583809_58754707	0/0	t0076	8892	1	0	0	0	1	0	copy fasta	ADAM10	chr15	58583809	58754707
ADAM10_chr15_58583809_58754707	0/0	t0077	8892	1	1	0	0	0	0	copy fasta	ADAM10	chr15	58583809	58754707
ADAM10_chr15_58583809_58754707	0/0	t0078	8890	1	1	0	0	0	0	copy fasta	ADAM10	chr15	58583809	58754707
ADAM10_chr15_58583809_58754707	0/0	t0079	8902	1	0	0	1	0	0	copy fasta	ADAM10	chr15	58583809	58754707
ADAM10_chr15_58583809_58754707	0/0	t0080	8899	1	0	0	1	0	0	copy fasta	ADAM10	chr15	58583809	58754707
ADAM10_chr15_58583809_58754707	0/0	t0081	8898	1	0	0	0	0	1	copy fasta	ADAM10	chr15	58583809	58754707
ADAM10_chr15_58583809_58754707	0/0	t0082	8897	1	0	0	1	0	0	copy fasta	ADAM10	chr15	58583809	58754707
ADAM10_chr15_58583809_58754707	0/0	t0083	8897	1	1	0	0	0	0	copy fasta	ADAM10	chr15	58583809	58754707
ADAM10_chr15_58583809_58754707	0/0	t0084	8896	1	1	0	0	0	0	copy fasta	ADAM10	chr15	58583809	58754707
ADAM10_chr15_58583809_58754707	0/0	t0085	8914	1	0	0	0	0	1	copy fasta	ADAM10	chr15	58583809	58754707
ADAM10_chr15_58583809_58754707	0/0	t0086	8912	1	0	0	0	0	1	copy fasta	ADAM10	chr15	58583809	58754707
ADAM10_chr15_58583809_58754707	0/1	t0087	8907	1	0	0	0	0	0	copy fasta	ADAM10	chr15	58583809	58754707
ADAM10_chr15_58583809_58754707	0/0	t0088	8905	1	0	1	0	0	0	copy fasta	ADAM10	chr15	58583809	58754707
ADAM10_chr15_58583809_58754707	0/0	t0089	8905	1	1	0	0	0	0	copy fasta	ADAM10	chr15	58583809	58754707
ADAM10_chr15_58583809_58754707	0/0	t0090	8904	1	0	1	0	0	0	copy fasta	ADAM10	chr15	58583809	58754707
ADAM10_chr15_58583809_58754707	0/0	t0091	8904	1	1	0	0	0	0	copy fasta	ADAM10	chr15	58583809	58754707
ADAM10_chr15_58583809_58754707	0/0	t0092	8903	1	0	1	0	0	0	copy fasta	ADAM10	chr15	58583809	58754707
ADAM10_chr15_58583809_58754707	0/0	t0093	8899	1	0	0	0	0	1	copy fasta	ADAM10	chr15	58583809	58754707
ADAM10_chr15_58583809_58754707	0/0	t0094	8897	1	0	0	1	0	0	copy fasta	ADAM10	chr15	58583809	58754707
ADAM10_chr15_58583809_58754707	0/0	t0095	8898	1	0	0	0	0	1	copy fasta	ADAM10	chr15	58583809	58754707
ADAM10_chr15_58583809_58754707	0/0	t0096	8891	1	1	0	0	0	0	copy fasta	ADAM10	chr15	58583809	58754707
ADAM10_chr15_58583809_58754707	0/0	t0097	8889	1	1	0	0	0	0	copy fasta	ADAM10	chr15	58583809	58754707
ADAM10_chr15_58583809_58754707	0/0	t0098	8888	1	1	0	0	0	0	copy fasta	ADAM10	chr15	58583809	58754707
ADAM10_chr15_58583809_58754707	0/0	t0099	8908	1	0	0	0	0	1	copy fasta	ADAM10	chr15	58583809	58754707
ADAM10_chr15_58583809_58754707	0/0	t0100	8930	1	0	0	1	0	0	copy fasta	ADAM10	chr15	58583809	58754707
ADAM10_chr15_58583809_58754707	0/0	t0101	8891	1	0	0	1	0	0	copy fasta	ADAM10	chr15	58583809	58754707
ADAM10_chr15_58583809_58754707	0/0	t0102	8890	1	0	0	1	0	0	copy fasta	ADAM10	chr15	58583809	58754707
ADAM10_chr15_58583809_58754707	0/0	t0103	8888	1	1	0	0	0	0	copy fasta	ADAM10	chr15	58583809	58754707
ADAM10_chr15_58583809_58754707	0/0	t0104	8887	1	0	0	0	1	0	copy fasta	ADAM10	chr15	58583809	58754707
ADAM10_chr15_58583809_58754707	0/0	t0105	8887	1	0	0	1	0	0	copy fasta	ADAM10	chr15	58583809	58754707
ADAM10_chr15_58583809_58754707	0/0	t0106	8885	1	0	0	0	0	1	copy fasta	ADAM10	chr15	58583809	58754707
ADAM10_chr15_58583809_58754707	0/0	t0107	8884	1	0	0	0	0	1	copy fasta	ADAM10	chr15	58583809	58754707
ADAM10_chr15_58583809_58754707	0/0	t0108	8890	1	1	0	0	0	0	copy fasta	ADAM10	chr15	58583809	58754707
ADAM10_chr15_58583809_58754707	0/0	t0109	8888	1	0	1	0	0	0	copy fasta	ADAM10	chr15	58583809	58754707
ADAM10_chr15_58583809_58754707	0/0	t0110	8888	1	0	0	1	0	0	copy fasta	ADAM10	chr15	58583809	58754707
ADAM10_chr15_58583809_58754707	0/0	t0111	8888	1	0	1	0	0	0	copy fasta	ADAM10	chr15	58583809	58754707
ADAM10_chr15_58583809_58754707	0/0	t0112	8901	1	0	0	1	0	0	copy fasta	ADAM10	chr15	58583809	58754707
ADAM10_chr15_58583809_58754707	0/0	t0113	8903	1	0	1	0	0	0	copy fasta	ADAM10	chr15	58583809	58754707
ADAM10_chr15_58583809_58754707	0/0	t0114	8914	1	0	0	0	1	0	copy fasta	ADAM10	chr15	58583809	58754707
ADAM10_chr15_58583809_58754707	0/0	t0115	8891	1	1	0	0	0	0	copy fasta	ADAM10	chr15	58583809	58754707
ADAM10_chr15_58583809_58754707	0/0	t0116	8893	1	1	0	0	0	0	copy fasta	ADAM10	chr15	58583809	58754707
ADAM10_chr15_58583809_58754707	0/0	t0117	8888	1	0	0	0	0	1	copy fasta	ADAM10	chr15	58583809	58754707
ADAM10_chr15_58583809_58754707	0/0	t0118	8912	1	0	0	0	1	0	copy fasta	ADAM10	chr15	58583809	58754707
ADAM10_chr15_58583809_58754707	0/0	t0119	8912	1	1	0	0	0	0	copy fasta	ADAM10	chr15	58583809	58754707
ADAM10_chr15_58583809_58754707	0/0	t0120	8900	1	1	0	0	0	0	copy fasta	ADAM10	chr15	58583809	58754707
ADAM10_chr15_58583809_58754707	0/0	t0121	8912	1	0	1	0	0	0	copy fasta	ADAM10	chr15	58583809	58754707
ADAM10_chr15_58583809_58754707	0/0	t0122	8893	1	0	1	0	0	0	copy fasta	ADAM10	chr15	58583809	58754707
ADAM11_chr17_44753988_44786846	0/1	t0001	2306	166	28	48	59	11	19	copy fasta	ADAM11	chr17	44753988	44786846
ADAM11_chr17_44753988_44786846	1/0	t0002	2305	44	8	5	23	1	6	copy fasta	ADAM11	chr17	44753988	44786846
ADAM11_chr17_44753988_44786846	0/0	t0003	2305	39	19	7	8	2	3	copy fasta	ADAM11	chr17	44753988	44786846