Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
ADAM11_chr17_44753988_44786846	0/0	t0004	2305	17	7	3	7	0	0	copy fasta	ADAM11	chr17	44753988	44786846
ADAM11_chr17_44753988_44786846	0/0	t0005	2306	13	11	2	0	0	0	copy fasta	ADAM11	chr17	44753988	44786846
ADAM11_chr17_44753988_44786846	0/0	t0006	2305	11	9	2	0	0	0	copy fasta	ADAM11	chr17	44753988	44786846
ADAM11_chr17_44753988_44786846	0/0	t0007	2305	8	8	0	0	0	0	copy fasta	ADAM11	chr17	44753988	44786846
ADAM11_chr17_44753988_44786846	0/0	t0008	2306	5	0	0	5	0	0	copy fasta	ADAM11	chr17	44753988	44786846
ADAM11_chr17_44753988_44786846	0/0	t0009	2305	5	0	2	2	0	1	copy fasta	ADAM11	chr17	44753988	44786846
ADAM11_chr17_44753988_44786846	0/0	t0010	2306	3	1	1	1	0	0	copy fasta	ADAM11	chr17	44753988	44786846
ADAM11_chr17_44753988_44786846	0/0	t0011	2306	2	0	0	2	0	0	copy fasta	ADAM11	chr17	44753988	44786846
ADAM11_chr17_44753988_44786846	0/0	t0012	2306	2	0	0	2	0	0	copy fasta	ADAM11	chr17	44753988	44786846
ADAM11_chr17_44753988_44786846	0/0	t0013	2305	2	0	0	2	0	0	copy fasta	ADAM11	chr17	44753988	44786846
ADAM11_chr17_44753988_44786846	0/0	t0014	2306	1	0	0	1	0	0	copy fasta	ADAM11	chr17	44753988	44786846
ADAM11_chr17_44753988_44786846	0/0	t0015	2306	1	1	0	0	0	0	copy fasta	ADAM11	chr17	44753988	44786846
ADAM11_chr17_44753988_44786846	0/0	t0016	2306	1	0	0	1	0	0	copy fasta	ADAM11	chr17	44753988	44786846
ADAM11_chr17_44753988_44786846	0/0	t0017	2305	1	0	0	1	0	0	copy fasta	ADAM11	chr17	44753988	44786846
ADAM11_chr17_44753988_44786846	0/0	t0018	2305	1	0	0	1	0	0	copy fasta	ADAM11	chr17	44753988	44786846
ADAM11_chr17_44753988_44786846	0/0	t0019	2305	1	0	0	1	0	0	copy fasta	ADAM11	chr17	44753988	44786846
ADAM11_chr17_44753988_44786846	0/0	t0020	2305	1	0	0	1	0	0	copy fasta	ADAM11	chr17	44753988	44786846
ADAM11_chr17_44753988_44786846	0/0	t0021	2305	1	1	0	0	0	0	copy fasta	ADAM11	chr17	44753988	44786846
ADAM11_chr17_44753988_44786846	0/0	t0022	2305	1	0	1	0	0	0	copy fasta	ADAM11	chr17	44753988	44786846
ADAM11_chr17_44753988_44786846	0/0	t0023	2306	1	0	0	1	0	0	copy fasta	ADAM11	chr17	44753988	44786846
ADAM11_chr17_44753988_44786846	0/0	t0024	2306	1	1	0	0	0	0	copy fasta	ADAM11	chr17	44753988	44786846
ADAM11_chr17_44753988_44786846	0/0	t0025	2305	1	0	1	0	0	0	copy fasta	ADAM11	chr17	44753988	44786846
ADAM11_chr17_44753988_44786846	0/0	t0026	2305	1	0	0	0	0	1	copy fasta	ADAM11	chr17	44753988	44786846
ADAM11_chr17_44753988_44786846	0/0	t0027	2305	1	0	0	0	0	1	copy fasta	ADAM11	chr17	44753988	44786846
ADAM11_chr17_44753988_44786846	0/0	t0028	2305	1	0	1	0	0	0	copy fasta	ADAM11	chr17	44753988	44786846
ADAM11_chr17_44753988_44786846	0/0	t0029	2305	1	0	0	1	0	0	copy fasta	ADAM11	chr17	44753988	44786846
ADAM11_chr17_44753988_44786846	0/0	t0030	2305	1	0	1	0	0	0	copy fasta	ADAM11	chr17	44753988	44786846
ADAM11_chr17_44753988_44786846	0/0	t0031	2306	1	0	0	1	0	0	copy fasta	ADAM11	chr17	44753988	44786846
ADAM11_chr17_44753988_44786846	0/0	t0032	2305	1	0	0	0	0	1	copy fasta	ADAM11	chr17	44753988	44786846
ADAM12_chr10_126007391_126393477	0/0	t0001	5217	56	8	10	25	4	9	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	t0002	5220	32	8	10	8	3	3	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/1	t0003	5224	18	3	4	6	2	2	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	1/0	t0004	5221	14	3	1	7	1	1	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	t0005	5218	13	1	5	5	0	2	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	t0006	5222	10	10	0	0	0	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	t0007	5222	9	0	0	9	0	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	t0008	5222	9	7	2	0	0	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	t0009	5224	8	0	0	7	1	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	t0010	5223	8	1	0	7	0	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	t0011	5221	7	7	0	0	0	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	t0012	5225	5	0	0	5	0	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	t0013	5224	4	3	0	1	0	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	t0014	5219	4	4	0	0	0	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	t0015	5222	3	0	0	0	0	3	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	t0016	5225	3	0	1	1	1	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	t0017	5217	3	2	1	0	0	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	t0018	5221	3	3	0	0	0	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	t0019	5221	3	0	1	2	0	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	t0020	5219	3	2	1	0	0	0	copy fasta	ADAM12	chr10	126007391	126393477
ADAM12_chr10_126007391_126393477	0/0	t0021	5218	3	3	0	0	0	0	copy fasta	ADAM12	chr10	126007391	126393477