Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
ADAMTS4_chr1_161179302_161204054	0/0	t0121	7296	1	0	1	0	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0122	7300	1	0	0	1	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0123	7297	1	0	0	1	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0124	7298	1	0	1	0	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0125	7298	1	1	0	0	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0126	7296	1	0	1	0	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0127	7297	1	0	1	0	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0128	7296	1	0	0	1	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0129	7296	1	0	0	1	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0130	7295	1	0	0	1	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0131	7294	1	0	0	1	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0132	7293	1	1	0	0	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0133	7293	1	0	0	1	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0134	7291	1	0	1	0	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0135	7293	1	0	0	1	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0136	7292	1	0	0	0	0	1	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0137	7291	1	0	0	1	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0138	7291	1	1	0	0	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0139	7288	1	0	1	0	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0140	7289	1	1	0	0	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0141	7288	1	0	0	1	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0142	7289	1	0	0	0	0	1	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0143	7285	1	1	0	0	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0144	7285	1	0	0	1	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0145	7285	1	0	1	0	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0146	7284	1	0	1	0	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0147	7282	1	0	0	0	0	1	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0148	7281	1	0	0	1	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0149	7279	1	0	0	1	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0150	7278	1	0	0	1	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0151	7276	1	0	0	1	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0152	7275	1	0	0	0	1	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0153	7268	1	1	0	0	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0154	7267	1	0	1	0	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0155	7267	1	1	0	0	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0156	7266	1	1	0	0	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0157	7266	1	1	0	0	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0158	7263	1	1	0	0	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0159	7263	1	0	0	0	0	1	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0160	7262	1	1	0	0	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0161	7261	1	0	0	0	0	1	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0162	7309	1	0	0	1	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0163	7298	1	0	0	1	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0164	7299	1	0	0	0	0	1	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0165	7297	1	0	0	0	0	1	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0166	7294	1	0	0	0	0	1	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0167	7263	1	0	1	0	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0168	7285	1	1	0	0	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0169	7277	1	1	0	0	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0170	7264	1	0	0	0	0	1	copy fasta	ADAMTS4	chr1	161179302	161204054