Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
ADAMTS4_chr1_161179302_161204054	0/0	t0171	7289	1	1	0	0	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0172	7290	1	0	0	0	1	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0173	7297	1	0	0	1	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0174	7285	1	0	0	1	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0175	7287	1	0	0	1	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0176	7285	1	0	0	1	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0177	7283	1	0	0	1	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0178	7285	1	1	0	0	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0179	7292	1	1	0	0	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0180	7296	1	0	0	1	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0181	7295	1	0	1	0	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0182	7294	1	0	1	0	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0183	7292	1	0	1	0	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0184	7287	1	0	1	0	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0185	7284	1	1	0	0	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0186	7284	1	0	1	0	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0187	7283	1	0	1	0	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0188	7282	1	0	0	1	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0189	7269	1	0	0	1	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0190	7268	1	0	0	1	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0191	7266	1	0	0	1	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0192	7265	1	0	0	1	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0193	7281	1	0	0	1	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0194	7302	1	0	0	1	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0195	7301	1	0	0	1	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0196	7297	1	0	0	1	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0197	7293	1	0	0	1	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0198	7291	1	0	0	1	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0199	7287	1	0	0	1	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0200	7285	1	0	0	1	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0201	7271	1	0	0	1	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0202	7283	1	0	0	1	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0203	7281	1	0	0	1	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0204	7278	1	0	0	1	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0205	7278	1	0	0	1	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0206	7277	1	0	0	1	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0207	7275	1	0	0	1	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0208	7264	1	0	0	1	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0209	7278	1	0	0	1	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0210	7280	1	0	0	1	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS4_chr1_161179302_161204054	0/0	t0211	7297	1	0	0	1	0	0	copy fasta	ADAMTS4	chr1	161179302	161204054
ADAMTS5_chr21_26912922_26972088	0/0	t0001	6828	25	0	0	23	1	1	copy fasta	ADAMTS5	chr21	26912922	26972088
ADAMTS5_chr21_26912922_26972088	0/0	t0002	6829	21	2	1	13	3	2	copy fasta	ADAMTS5	chr21	26912922	26972088
ADAMTS5_chr21_26912922_26972088	0/0	t0003	6829	13	2	3	7	0	1	copy fasta	ADAMTS5	chr21	26912922	26972088
ADAMTS5_chr21_26912922_26972088	0/0	t0004	6830	11	1	7	2	1	0	copy fasta	ADAMTS5	chr21	26912922	26972088
ADAMTS5_chr21_26912922_26972088	0/0	t0005	6830	11	2	5	1	2	1	copy fasta	ADAMTS5	chr21	26912922	26972088
ADAMTS5_chr21_26912922_26972088	0/0	t0006	6827	10	0	4	5	0	1	copy fasta	ADAMTS5	chr21	26912922	26972088
ADAMTS5_chr21_26912922_26972088	0/0	t0007	6830	10	1	3	6	0	0	copy fasta	ADAMTS5	chr21	26912922	26972088
ADAMTS5_chr21_26912922_26972088	0/0	t0008	6830	10	0	0	7	1	2	copy fasta	ADAMTS5	chr21	26912922	26972088
ADAMTS5_chr21_26912922_26972088	0/0	t0009	6827	9	0	3	4	0	2	copy fasta	ADAMTS5	chr21	26912922	26972088