Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
ADARB1_chr21_45069580_45231560	0/0	t0005	5794	8	5	3	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0006	5914	8	0	0	8	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0007	5872	7	2	0	3	2	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0008	5792	5	5	0	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0009	5915	5	0	5	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0010	5872	4	0	0	4	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0011	5914	4	0	0	4	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0012	5914	4	4	0	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0013	5788	3	3	0	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0014	5914	3	3	0	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0015	5914	3	2	1	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0016	5914	3	1	0	0	1	1	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0017	5835	3	0	0	0	2	1	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0018	5914	3	3	0	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0019	5920	3	0	0	3	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0020	5841	3	0	2	1	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0021	5887	3	0	0	3	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0022	5932	3	0	0	3	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0023	5935	3	0	0	3	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0024	5865	3	0	0	2	0	1	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0025	5860	2	0	0	2	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0026	5915	2	1	0	1	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0027	5914	2	0	0	0	0	2	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0028	5751	2	2	0	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0029	5793	2	1	1	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0030	5914	2	0	2	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0031	5835	2	0	0	1	0	1	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0032	5752	2	2	0	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0033	5752	2	2	0	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0034	5836	2	0	0	1	0	1	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0035	5926	2	0	2	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0036	5920	2	0	1	1	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0037	5878	2	0	0	2	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0038	5850	2	0	1	1	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0039	5758	2	1	1	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0040	5932	2	0	0	2	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0041	5938	2	0	1	1	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0042	5938	2	0	0	2	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0043	5859	2	0	2	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0044	5835	1	0	0	0	0	1	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0045	5872	1	0	0	1	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0046	5835	1	1	0	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0047	5872	1	0	0	0	1	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0048	5752	1	1	0	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0049	5794	1	1	0	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0050	5794	1	1	0	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0051	5794	1	1	0	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0052	5914	1	0	0	1	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0053	5872	1	0	0	1	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0054	5750	1	1	0	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560