Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
ADARB1_chr21_45069580_45231560	0/0	t0055	5751	1	1	0	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0056	5788	1	1	0	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0057	5872	1	0	0	0	0	1	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0058	5795	1	1	0	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0059	5793	1	1	0	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0060	5793	1	1	0	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0061	5794	1	1	0	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0062	5872	1	0	0	1	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0063	5914	1	0	0	0	0	1	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0064	5835	1	0	0	0	0	1	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0065	5835	1	1	0	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0066	5835	1	0	0	0	0	1	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0067	5872	1	0	0	1	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0068	5830	1	0	0	0	1	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0069	5794	1	1	0	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0070	5793	1	1	0	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0071	5794	1	1	0	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0072	5920	1	1	0	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0073	5920	1	1	0	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0074	5793	1	0	0	0	0	1	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0075	5914	1	0	1	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0076	5914	1	0	1	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0077	5794	1	0	0	0	0	1	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0078	5872	1	0	0	1	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0079	5839	1	0	0	1	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0080	5834	1	0	1	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0081	5835	1	0	1	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0082	5835	1	0	0	0	0	1	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0083	5872	1	0	1	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0084	5872	1	0	0	0	0	1	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0085	5751	1	0	0	0	0	1	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0086	5835	1	1	0	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0087	5835	1	0	0	1	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0088	5836	1	1	0	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	1/0	t0089	4797	1	0	0	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0090	5835	1	0	1	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0091	5835	1	0	1	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0092	5914	1	0	0	0	0	1	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0093	5914	1	1	0	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0094	5788	1	1	0	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0095	5914	1	1	0	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0096	5793	1	1	0	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0097	5926	1	0	1	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0098	5847	1	0	1	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0099	5796	1	1	0	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0100	5917	1	0	0	0	0	1	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0101	5755	1	1	0	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0102	5875	1	0	0	1	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0103	5920	1	0	0	1	0	0	copy fasta	ADARB1	chr21	45069580	45231560
ADARB1_chr21_45069580_45231560	0/0	t0104	5915	1	0	1	0	0	0	copy fasta	ADARB1	chr21	45069580	45231560