Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

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Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	SAS	tseq	genename	chr	start	end
ADCY9_chr16_3957653_4121442	0/0	t0060	3896	1	1	0	0	0	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0061	3918	1	1	0	0	0	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0062	3916	1	1	0	0	0	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0063	3916	1	1	0	0	0	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0064	3918	1	0	1	0	0	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0065	3912	1	1	0	0	0	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0066	3918	1	0	0	0	1	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0067	3917	1	1	0	0	0	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0068	3921	1	1	0	0	0	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0069	3917	1	0	1	0	0	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0070	3915	1	1	0	0	0	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0071	3912	1	1	0	0	0	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0072	3898	1	0	0	1	0	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0073	3896	1	0	0	0	1	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0074	3922	1	0	0	1	0	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0075	3906	1	0	0	1	0	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0076	3902	1	0	0	1	0	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0077	3894	1	0	1	0	0	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0078	3896	1	1	0	0	0	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0079	3898	1	0	0	1	0	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0080	3896	1	0	0	1	0	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0081	3895	1	1	0	0	0	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0082	3898	1	0	0	1	0	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0083	3920	1	1	0	0	0	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0084	3916	1	0	1	0	0	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0085	3918	1	1	0	0	0	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0086	3916	1	1	0	0	0	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0087	3922	1	0	0	1	0	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0088	3914	1	0	0	1	0	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0089	3918	1	1	0	0	0	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0090	3916	1	1	0	0	0	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0091	3914	1	1	0	0	0	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0092	3912	1	0	1	0	0	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0093	3906	1	1	0	0	0	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0094	3894	1	0	1	0	0	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0095	3910	1	0	1	0	0	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0096	3910	1	1	0	0	0	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0097	3917	1	0	0	1	0	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0098	3920	1	1	0	0	0	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0099	3886	1	1	0	0	0	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0100	3898	1	1	0	0	0	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0101	3898	1	1	0	0	0	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0102	3930	1	0	0	0	1	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0103	3916	1	0	0	1	0	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0104	3886	1	0	0	1	0	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0105	3918	1	0	0	1	0	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0106	3910	1	0	0	0	1	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0107	3902	1	1	0	0	0	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0108	3900	1	1	0	0	0	copy fasta	ADCY9	chr16	3957653	4121442
ADCY9_chr16_3957653_4121442	0/0	t0109	3886	1	0	0	1	0	copy fasta	ADCY9	chr16	3957653	4121442