| regionname | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2 |
thapid | tlen | total | AFR | AMR | EAS | EUR | SAS | tseq | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
0/0 | t0027 | 2105 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | CSGALNACT1 | chr8 | 19399161 | 19762277 |
|
0/0 | t0028 | 2103 | 1 | 0 | 0 | 0 | 1 | 0 | copy fasta | CSGALNACT1 | chr8 | 19399161 | 19762277 |
|
0/0 | t0029 | 2105 | 1 | 0 | 0 | 0 | 0 | 1 | copy fasta | CSGALNACT1 | chr8 | 19399161 | 19762277 |
|
0/0 | t0030 | 2107 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | CSGALNACT1 | chr8 | 19399161 | 19762277 |
|
0/0 | t0031 | 2103 | 1 | 0 | 1 | 0 | 0 | 0 | copy fasta | CSGALNACT1 | chr8 | 19399161 | 19762277 |
|
0/0 | t0032 | 2103 | 1 | 0 | 1 | 0 | 0 | 0 | copy fasta | CSGALNACT1 | chr8 | 19399161 | 19762277 |
|
0/0 | t0033 | 2107 | 1 | 0 | 0 | 0 | 0 | 1 | copy fasta | CSGALNACT1 | chr8 | 19399161 | 19762277 |
|
0/0 | t0034 | 2103 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | CSGALNACT1 | chr8 | 19399161 | 19762277 |
|
0/0 | t0035 | 2107 | 1 | 0 | 1 | 0 | 0 | 0 | copy fasta | CSGALNACT1 | chr8 | 19399161 | 19762277 |
|
0/0 | t0036 | 2107 | 1 | 0 | 0 | 1 | 0 | 0 | copy fasta | CSGALNACT1 | chr8 | 19399161 | 19762277 |
|
0/0 | t0037 | 2103 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | CSGALNACT1 | chr8 | 19399161 | 19762277 |
|
0/0 | t0038 | 2105 | 1 | 0 | 0 | 0 | 1 | 0 | copy fasta | CSGALNACT1 | chr8 | 19399161 | 19762277 |
|
0/0 | t0039 | 2103 | 1 | 0 | 1 | 0 | 0 | 0 | copy fasta | CSGALNACT1 | chr8 | 19399161 | 19762277 |
|
0/0 | t0040 | 2107 | 1 | 0 | 1 | 0 | 0 | 0 | copy fasta | CSGALNACT1 | chr8 | 19399161 | 19762277 |
|
0/0 | t0041 | 2103 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | CSGALNACT1 | chr8 | 19399161 | 19762277 |
|
0/0 | t0042 | 2089 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | CSGALNACT1 | chr8 | 19399161 | 19762277 |
|
0/0 | t0043 | 2107 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | CSGALNACT1 | chr8 | 19399161 | 19762277 |
|
0/0 | t0044 | 2105 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | CSGALNACT1 | chr8 | 19399161 | 19762277 |
|
0/0 | t0045 | 2103 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | CSGALNACT1 | chr8 | 19399161 | 19762277 |
|
0/0 | t0046 | 2103 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | CSGALNACT1 | chr8 | 19399161 | 19762277 |
|
0/0 | t0047 | 2103 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | CSGALNACT1 | chr8 | 19399161 | 19762277 |
|
0/0 | t0048 | 2103 | 1 | 0 | 1 | 0 | 0 | 0 | copy fasta | CSGALNACT1 | chr8 | 19399161 | 19762277 |
|
0/1 | t0001 | 2137 | 152 | 43 | 28 | 52 | 11 | 17 | copy fasta | CSGALNACT2 | chr10 | 43133445 | 43190302 |
|
1/0 | t0002 | 2137 | 97 | 1 | 14 | 70 | 1 | 10 | copy fasta | CSGALNACT2 | chr10 | 43133445 | 43190302 |
|
0/0 | t0003 | 2137 | 42 | 13 | 13 | 10 | 2 | 4 | copy fasta | CSGALNACT2 | chr10 | 43133445 | 43190302 |
|
0/0 | t0004 | 2138 | 39 | 0 | 0 | 35 | 0 | 4 | copy fasta | CSGALNACT2 | chr10 | 43133445 | 43190302 |
|
0/0 | t0005 | 2137 | 15 | 11 | 4 | 0 | 0 | 0 | copy fasta | CSGALNACT2 | chr10 | 43133445 | 43190302 |
|
0/0 | t0006 | 2137 | 11 | 11 | 0 | 0 | 0 | 0 | copy fasta | CSGALNACT2 | chr10 | 43133445 | 43190302 |
|
0/0 | t0007 | 2137 | 10 | 1 | 7 | 0 | 0 | 2 | copy fasta | CSGALNACT2 | chr10 | 43133445 | 43190302 |
|
0/0 | t0008 | 2137 | 7 | 1 | 2 | 0 | 0 | 4 | copy fasta | CSGALNACT2 | chr10 | 43133445 | 43190302 |
|
0/0 | t0009 | 2137 | 6 | 4 | 2 | 0 | 0 | 0 | copy fasta | CSGALNACT2 | chr10 | 43133445 | 43190302 |
|
0/0 | t0010 | 2137 | 6 | 0 | 1 | 5 | 0 | 0 | copy fasta | CSGALNACT2 | chr10 | 43133445 | 43190302 |
|
0/0 | t0011 | 2137 | 4 | 3 | 1 | 0 | 0 | 0 | copy fasta | CSGALNACT2 | chr10 | 43133445 | 43190302 |
|
0/0 | t0012 | 2137 | 1 | 0 | 0 | 0 | 0 | 1 | copy fasta | CSGALNACT2 | chr10 | 43133445 | 43190302 |
|
0/0 | t0013 | 2137 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | CSGALNACT2 | chr10 | 43133445 | 43190302 |
|
0/0 | t0014 | 2137 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | CSGALNACT2 | chr10 | 43133445 | 43190302 |
|
0/0 | t0015 | 2137 | 1 | 0 | 1 | 0 | 0 | 0 | copy fasta | CSGALNACT2 | chr10 | 43133445 | 43190302 |
|
0/0 | t0016 | 2137 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | CSGALNACT2 | chr10 | 43133445 | 43190302 |
|
0/0 | t0017 | 2137 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | CSGALNACT2 | chr10 | 43133445 | 43190302 |
|
0/0 | t0018 | 2137 | 1 | 0 | 1 | 0 | 0 | 0 | copy fasta | CSGALNACT2 | chr10 | 43133445 | 43190302 |
|
0/0 | t0019 | 2137 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | CSGALNACT2 | chr10 | 43133445 | 43190302 |
|
0/0 | t0020 | 2137 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | CSGALNACT2 | chr10 | 43133445 | 43190302 |
|
1/1 | t0001 | 168 | 420 | 84 | 80 | 190 | 16 | 48 | copy fasta | CSH1 | chr17 | 63889918 | 63901574 |
|
0/0 | t0002 | 173 | 3 | 3 | 0 | 0 | 0 | 0 | copy fasta | CSH1 | chr17 | 63889918 | 63901574 |
|
0/0 | t0003 | 173 | 2 | 1 | 1 | 0 | 0 | 0 | copy fasta | CSH1 | chr17 | 63889918 | 63901574 |
|
0/0 | t0004 | 168 | 1 | 0 | 0 | 1 | 0 | 0 | copy fasta | CSH1 | chr17 | 63889918 | 63901574 |
|
0/0 | t0005 | 168 | 1 | 0 | 1 | 0 | 0 | 0 | copy fasta | CSH1 | chr17 | 63889918 | 63901574 |
|
0/0 | t0006 | 168 | 1 | 0 | 0 | 1 | 0 | 0 | copy fasta | CSH1 | chr17 | 63889918 | 63901574 |
|
0/0 | t0000 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | copy fasta | CSH2 | chr17 | 63867016 | 63878677 |
|
0/0 | t0001 | 174 | 210 | 55 | 34 | 86 | 10 | 25 | copy fasta | CSH2 | chr17 | 63867016 | 63878677 |