JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
DHODH_chr16_72003744_72032659	0/0	t0022	3480	3	0	0	3	0	0	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0023	3480	3	3	0	0	0	0	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0024	3474	3	2	1	0	0	0	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0025	3466	3	0	0	3	0	0	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0026	3454	3	0	1	0	0	2	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0027	3473	2	0	0	0	0	2	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0028	3476	2	0	2	0	0	0	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0029	3478	2	0	0	1	0	1	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0030	3480	2	0	2	0	0	0	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0031	3476	2	0	2	0	0	0	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0032	3468	2	0	1	0	0	1	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0033	3476	2	2	0	0	0	0	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0034	3472	2	1	1	0	0	0	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0035	3470	2	0	0	0	1	1	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0036	3468	2	0	0	2	0	0	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0037	3473	2	2	0	0	0	0	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0038	3476	2	2	0	0	0	0	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0039	3480	1	0	0	1	0	0	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0040	3478	1	1	0	0	0	0	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0041	3473	1	0	0	1	0	0	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0042	3477	1	0	1	0	0	0	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0043	3473	1	0	1	0	0	0	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0044	3471	1	0	0	0	0	1	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0045	3471	1	0	1	0	0	0	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0046	3480	1	0	0	0	0	1	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0047	3482	1	1	0	0	0	0	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0048	3480	1	1	0	0	0	0	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0049	3464	1	0	0	1	0	0	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0050	3476	1	0	0	1	0	0	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0051	3470	1	1	0	0	0	0	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0052	3478	1	0	0	1	0	0	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0053	3468	1	0	0	1	0	0	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0054	3472	1	0	0	1	0	0	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0055	3481	1	0	0	1	0	0	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0056	3484	1	0	0	1	0	0	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0057	3478	1	1	0	0	0	0	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0058	3471	1	1	0	0	0	0	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0059	3464	1	0	0	1	0	0	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0060	3468	1	0	0	1	0	0	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0061	3472	1	0	1	0	0	0	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0062	3470	1	1	0	0	0	0	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0063	3472	1	1	0	0	0	0	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0064	3464	1	0	0	1	0	0	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0065	3458	1	0	0	0	0	1	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0066	3468	1	0	0	1	0	0	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0067	3468	1	0	0	0	0	1	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0068	3468	1	0	0	0	0	1	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0069	3469	1	0	0	1	0	0	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0070	3458	1	0	0	0	0	1	copy fasta	DHODH	chr16	72003744	72032659
DHODH_chr16_72003744_72032659	0/0	t0071	3473	1	0	1	0	0	0	copy fasta	DHODH	chr16	72003744	72032659