JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
DLG4_chr17_7182187_7222627	0/0	t0094	3997	1	0	0	1	0	0	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0095	4012	1	0	1	0	0	0	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0096	3999	1	0	0	1	0	0	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0097	4000	1	0	0	1	0	0	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0098	3999	1	0	1	0	0	0	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0099	4003	1	0	1	0	0	0	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0100	4000	1	0	1	0	0	0	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0101	4000	1	0	0	0	0	1	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0102	3999	1	0	0	1	0	0	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0103	4008	1	0	0	0	0	1	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0104	4005	1	1	0	0	0	0	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0105	4005	1	0	0	0	0	1	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0106	4003	1	0	0	1	0	0	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0107	3999	1	1	0	0	0	0	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0108	3995	1	1	0	0	0	0	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0109	4006	1	0	0	1	0	0	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0110	4019	1	1	0	0	0	0	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0111	4001	1	1	0	0	0	0	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0112	3998	1	0	0	1	0	0	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0113	4006	1	0	0	1	0	0	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0114	4005	1	0	1	0	0	0	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0115	4003	1	0	0	1	0	0	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0116	3998	1	0	1	0	0	0	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0117	4004	1	1	0	0	0	0	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0118	4003	1	0	0	1	0	0	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0119	3999	1	1	0	0	0	0	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0120	3997	1	0	0	1	0	0	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0121	3995	1	0	0	1	0	0	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0122	4004	1	0	1	0	0	0	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0123	4009	1	0	1	0	0	0	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0124	3995	1	0	1	0	0	0	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0125	3995	1	0	1	0	0	0	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0126	4008	1	1	0	0	0	0	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0127	4005	1	0	0	0	1	0	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0128	3999	1	1	0	0	0	0	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0129	3998	1	1	0	0	0	0	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0130	3998	1	0	0	1	0	0	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0131	4000	1	0	0	1	0	0	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0132	3998	1	0	0	0	0	1	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0133	4001	1	0	1	0	0	0	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0134	4006	1	0	0	0	0	1	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0135	4006	1	0	0	1	0	0	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0136	4004	1	0	0	1	0	0	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0137	4003	1	0	0	0	1	0	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0138	4001	1	0	0	1	0	0	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0139	4002	1	0	0	1	0	0	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0140	4006	1	0	1	0	0	0	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0141	4005	1	0	0	0	1	0	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0142	3996	1	1	0	0	0	0	copy fasta	DLG4	chr17	7182187	7222627
DLG4_chr17_7182187_7222627	0/0	t0143	3995	1	0	1	0	0	0	copy fasta	DLG4	chr17	7182187	7222627