JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
EIF5_chr14_103329237_103350025	0/0	t0018	4425	2	0	0	2	0	0	copy fasta	EIF5	chr14	103329237	103350025
EIF5_chr14_103329237_103350025	0/0	t0019	4421	2	0	2	0	0	0	copy fasta	EIF5	chr14	103329237	103350025
EIF5_chr14_103329237_103350025	0/0	t0020	4417	2	2	0	0	0	0	copy fasta	EIF5	chr14	103329237	103350025
EIF5_chr14_103329237_103350025	0/0	t0021	4415	2	0	2	0	0	0	copy fasta	EIF5	chr14	103329237	103350025
EIF5_chr14_103329237_103350025	0/0	t0022	4419	2	2	0	0	0	0	copy fasta	EIF5	chr14	103329237	103350025
EIF5_chr14_103329237_103350025	0/0	t0023	4415	2	2	0	0	0	0	copy fasta	EIF5	chr14	103329237	103350025
EIF5_chr14_103329237_103350025	0/0	t0024	4419	2	0	0	2	0	0	copy fasta	EIF5	chr14	103329237	103350025
EIF5_chr14_103329237_103350025	0/0	t0025	4419	2	2	0	0	0	0	copy fasta	EIF5	chr14	103329237	103350025
EIF5_chr14_103329237_103350025	0/0	t0026	4419	2	2	0	0	0	0	copy fasta	EIF5	chr14	103329237	103350025
EIF5_chr14_103329237_103350025	0/0	t0027	4415	1	0	0	1	0	0	copy fasta	EIF5	chr14	103329237	103350025
EIF5_chr14_103329237_103350025	0/0	t0028	4421	1	0	0	0	1	0	copy fasta	EIF5	chr14	103329237	103350025
EIF5_chr14_103329237_103350025	0/0	t0029	4421	1	0	0	1	0	0	copy fasta	EIF5	chr14	103329237	103350025
EIF5_chr14_103329237_103350025	0/0	t0030	4421	1	0	0	1	0	0	copy fasta	EIF5	chr14	103329237	103350025
EIF5_chr14_103329237_103350025	0/0	t0031	4421	1	0	1	0	0	0	copy fasta	EIF5	chr14	103329237	103350025
EIF5_chr14_103329237_103350025	0/0	t0032	4421	1	0	0	0	0	1	copy fasta	EIF5	chr14	103329237	103350025
EIF5_chr14_103329237_103350025	0/0	t0033	4421	1	0	0	1	0	0	copy fasta	EIF5	chr14	103329237	103350025
EIF5_chr14_103329237_103350025	0/0	t0034	4417	1	0	0	0	1	0	copy fasta	EIF5	chr14	103329237	103350025
EIF5_chr14_103329237_103350025	0/0	t0035	4417	1	1	0	0	0	0	copy fasta	EIF5	chr14	103329237	103350025
EIF5_chr14_103329237_103350025	0/0	t0036	4414	1	1	0	0	0	0	copy fasta	EIF5	chr14	103329237	103350025
EIF5_chr14_103329237_103350025	0/0	t0037	4415	1	1	0	0	0	0	copy fasta	EIF5	chr14	103329237	103350025
EIF5_chr14_103329237_103350025	0/0	t0038	4415	1	0	0	1	0	0	copy fasta	EIF5	chr14	103329237	103350025
EIF5_chr14_103329237_103350025	0/0	t0039	4415	1	0	1	0	0	0	copy fasta	EIF5	chr14	103329237	103350025
EIF5_chr14_103329237_103350025	0/0	t0040	4415	1	0	0	0	0	1	copy fasta	EIF5	chr14	103329237	103350025
EIF5_chr14_103329237_103350025	0/0	t0041	4415	1	0	1	0	0	0	copy fasta	EIF5	chr14	103329237	103350025
EIF5_chr14_103329237_103350025	0/0	t0042	4415	1	0	1	0	0	0	copy fasta	EIF5	chr14	103329237	103350025
EIF5_chr14_103329237_103350025	0/0	t0043	4415	1	0	1	0	0	0	copy fasta	EIF5	chr14	103329237	103350025
EIF5_chr14_103329237_103350025	0/0	t0044	4415	1	0	0	1	0	0	copy fasta	EIF5	chr14	103329237	103350025
EIF5_chr14_103329237_103350025	0/0	t0045	4415	1	0	0	0	0	1	copy fasta	EIF5	chr14	103329237	103350025
EIF5_chr14_103329237_103350025	0/0	t0046	4415	1	0	0	0	0	1	copy fasta	EIF5	chr14	103329237	103350025
EIF5_chr14_103329237_103350025	0/0	t0047	4415	1	0	0	0	0	1	copy fasta	EIF5	chr14	103329237	103350025
EIF5_chr14_103329237_103350025	0/0	t0048	4413	1	1	0	0	0	0	copy fasta	EIF5	chr14	103329237	103350025
EIF5_chr14_103329237_103350025	0/0	t0049	4415	1	0	0	1	0	0	copy fasta	EIF5	chr14	103329237	103350025
EIF5_chr14_103329237_103350025	0/0	t0050	4415	1	1	0	0	0	0	copy fasta	EIF5	chr14	103329237	103350025
EIF5_chr14_103329237_103350025	0/0	t0051	4417	1	0	1	0	0	0	copy fasta	EIF5	chr14	103329237	103350025
EIF5_chr14_103329237_103350025	0/0	t0052	4415	1	1	0	0	0	0	copy fasta	EIF5	chr14	103329237	103350025
EIF5_chr14_103329237_103350025	0/0	t0053	4419	1	1	0	0	0	0	copy fasta	EIF5	chr14	103329237	103350025
EIF5_chr14_103329237_103350025	0/0	t0054	4415	1	1	0	0	0	0	copy fasta	EIF5	chr14	103329237	103350025
EIF5_chr14_103329237_103350025	0/0	t0055	4419	1	0	0	1	0	0	copy fasta	EIF5	chr14	103329237	103350025
EIF5_chr14_103329237_103350025	0/0	t0056	4419	1	1	0	0	0	0	copy fasta	EIF5	chr14	103329237	103350025
EIF5_chr14_103329237_103350025	0/0	t0057	4419	1	1	0	0	0	0	copy fasta	EIF5	chr14	103329237	103350025
EIF5_chr14_103329237_103350025	0/0	t0058	4419	1	1	0	0	0	0	copy fasta	EIF5	chr14	103329237	103350025
EIF6_chr20_35273918_35289772	1/1	t0001	332	280	67	59	120	8	24	copy fasta	EIF6	chr20	35273918	35289772
EIF6_chr20_35273918_35289772	0/0	t0002	332	100	26	13	35	9	17	copy fasta	EIF6	chr20	35273918	35289772
EIF6_chr20_35273918_35289772	0/0	t0003	332	1	0	0	0	0	1	copy fasta	EIF6	chr20	35273918	35289772
EIF6_chr20_35273918_35289772	0/0	t0004	332	1	0	0	1	0	0	copy fasta	EIF6	chr20	35273918	35289772
EIF6_chr20_35273918_35289772	0/0	t0005	332	1	1	0	0	0	0	copy fasta	EIF6	chr20	35273918	35289772
EIF6_chr20_35273918_35289772	0/0	t0006	332	1	0	0	1	0	0	copy fasta	EIF6	chr20	35273918	35289772
EIF6_chr20_35273918_35289772	0/0	t0007	332	1	0	0	0	1	0	copy fasta	EIF6	chr20	35273918	35289772
EIF6_chr20_35273918_35289772	0/0	t0008	332	1	0	0	1	0	0	copy fasta	EIF6	chr20	35273918	35289772
EIPR1_chr2_3183970_3382818	0/0	t0001	494	116	52	24	21	4	15	copy fasta	EIPR1	chr2	3183970	3382818