JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
ELOVL6_chr4_110040846_110203615	0/0	t0004	5772	20	3	3	8	3	3	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0005	5763	19	1	2	11	0	5	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0006	5773	18	1	3	13	0	1	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0007	5775	11	11	0	0	0	0	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0008	5774	7	0	3	0	3	1	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0009	5770	6	5	1	0	0	0	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0010	5773	5	0	0	5	0	0	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0011	5775	5	5	0	0	0	0	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0012	5773	5	0	0	5	0	0	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0013	5777	4	0	0	4	0	0	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0014	5773	4	4	0	0	0	0	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0015	5774	4	4	0	0	0	0	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0016	5776	4	0	1	2	0	1	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0017	5774	4	0	1	0	3	0	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0018	5774	4	4	0	0	0	0	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0019	5773	3	0	3	0	0	0	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0020	5773	3	0	0	3	0	0	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0021	5776	3	3	0	0	0	0	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0022	5774	3	3	0	0	0	0	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0023	5773	2	0	2	0	0	0	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0024	5773	2	0	0	2	0	0	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0025	5776	2	2	0	0	0	0	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0026	5771	2	2	0	0	0	0	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0027	5776	2	2	0	0	0	0	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0028	5771	2	1	1	0	0	0	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0029	5777	2	0	2	0	0	0	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0030	5771	2	2	0	0	0	0	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0031	5774	2	0	0	2	0	0	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0032	5772	2	0	1	0	1	0	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0033	5774	2	2	0	0	0	0	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0034	5774	2	2	0	0	0	0	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0035	5777	2	1	1	0	0	0	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0036	5773	1	0	1	0	0	0	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0037	5775	1	1	0	0	0	0	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0038	5775	1	1	0	0	0	0	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0039	5773	1	0	0	1	0	0	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0040	5772	1	0	0	1	0	0	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0041	5774	1	0	0	1	0	0	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0042	5763	1	1	0	0	0	0	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0043	5775	1	1	0	0	0	0	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0044	5774	1	1	0	0	0	0	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0045	5777	1	0	0	0	0	1	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0046	5774	1	0	0	0	0	1	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0047	5773	1	1	0	0	0	0	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0048	5777	1	0	0	1	0	0	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0049	5776	1	0	1	0	0	0	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0050	5774	1	1	0	0	0	0	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0051	5773	1	1	0	0	0	0	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0052	5775	1	0	0	1	0	0	copy fasta	ELOVL6	chr4	110040846	110203615
ELOVL6_chr4_110040846_110203615	0/0	t0053	5775	1	0	0	1	0	0	copy fasta	ELOVL6	chr4	110040846	110203615